FastQCFastQC Report
Wed 12 Jan 2022
000000000-JNBDR_l01_n02_HW6_91_v2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-JNBDR_l01_n02_HW6_91_v2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences141826
Sequences flagged as poor quality0
Sequence length301
%GC57

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGCCACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC2883820.333366237502293No Hit
GTCAGGACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC2771819.543666182505323No Hit
CCTCTTACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC2058014.51073851056929No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT26791.888934327979355No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT26161.8445136998857754No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT18921.3340290214770212No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT18611.3121712520976407No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT14531.0244948034916024No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT11320.7981611270147928No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT10500.7403438015596576No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT9250.6522076347073174No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA8030.5661867358594334No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA7930.5591358425112462No Hit
GTCAGGACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT6900.48651164102491784No Hit
AAGGCCACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT5600.394850027498484No Hit
CCTCTTACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT4840.3412632380522612No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA3330.23479474849463425No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTACCTT3070.21646242578934752No Hit
CCTCTTACGCCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC2900.20447590709742924No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTACCTT2450.17274688703058677No Hit
AAGGCCACGTCATCCCCACCTTCCTCACAGTTTGCACTGGCAGTCTTGTT2260.15935018966903108No Hit
CCTCTTACGTCATCCCCACCTTCCTCCAGTTTATCACTGGCAGTCTCCTT1820.12832625893700733No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT1540.10858375756208312No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)