FastQCFastQC Report
Wed 12 Jan 2022
000000000-JNBDR_l01_n02_HW6_87_v2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-JNBDR_l01_n02_HW6_87_v2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences172914
Sequences flagged as poor quality0
Sequence length301
%GC57

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGCCACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC3509920.2985299050395No Hit
GTCAGGACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC2755815.937402408133522No Hit
TCGTAGACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC134757.7928912638652745No Hit
CCTCTTACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC103675.995465954173751No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT24831.435973952369386No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT24111.3943347560058759No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT22411.2960199868142543No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT20781.201753472824641No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT18661.0791491724209723No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT18601.0756792393906798No Hit
TCGTAGACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT15400.8906161444417457No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT15250.8819413118660142No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA10300.5956718368668819No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT8460.4892605572712446No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTACCTT7310.42275350752397145No Hit
GTCAGGACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT6090.3521982025746903No Hit
AAGGCCACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT6020.34814994737268234No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA5210.30130585146373345No Hit
CCTCTTACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT4570.2642932324739466No Hit
TCGTAGACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT4200.24289531212047608No Hit
TCGTAGACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT4120.2382687347467527No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTACCTT3730.21571417004985138No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTACCTT3650.211087592676128No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT3170.1833281284337879No Hit
AAGGCCACGTCATCCCCACCTTCCTCACAGTTTGCACTGGCAGTCTTGTT3130.1810148397469262No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA2830.16366517459546365No Hit
TCGTAGACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA1920.1110378569693605No Hit
CCTCTTACGCCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC1870.1081462461107834No Hit
AAGGCCACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCC1740.10062805787848296No Hit
GTCAGGACGTCATCCCCACCTTCCTCACAGTTTGCACTGGCAGTCTTGTT1730.10004973570676753No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)