FastQCFastQC Report
Wed 12 Jan 2022
000000000-JNBDR_l01_n02_HW6_85_v2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-JNBDR_l01_n02_HW6_85_v2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences174980
Sequences flagged as poor quality0
Sequence length301
%GC57

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCTTACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC3142517.9591953366099No Hit
TCGTAGACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC2989617.085381186421305No Hit
AAGGCCACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC1959911.20070865241742No Hit
GTCAGGACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC117386.708195222311121No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT25491.4567379129043319No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT22381.279003314664533No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT20361.1635615498914162No Hit
TCGTAGACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT17591.005257743742142No Hit
TCGTAGACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT17581.0046862498571265No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT17090.9766830494913704No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT12760.7292261972796891No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT8440.4823408389530232No Hit
TCGTAGACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA6550.37432849468510687No Hit
TCGTAGACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT6510.3720425191450451No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA6450.36861355583495253No Hit
CCTCTTACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT5400.3086066979083324No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA5190.29660532632300834No Hit
TCGTAGACGTCATCCCCACCTTCCTCCAGTTTATCACTGGCAGTCTCCTT4890.27946050977254544No Hit
AAGGCCACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT4700.26860212595725225No Hit
TCGTAGACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT4150.23716996228140358No Hit
CCTCTTACGTCATCCCCACCTTCCTCCAGTTTATCACTGGCAGTCTCCTT3940.22516859069607953No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT3450.19716539033032346No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTACCTT2660.15201737341410448No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTACCTT2630.1503028917590582No Hit
TCGTAGACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTACCTT2610.14915990398902731No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT2500.14287347125385758No Hit
CCTCTTACGTCATCCCCACCTTCCTCACAGTTTGCACTGGCAGTCTTGTT2420.13830152017373415No Hit
TCGTAGACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCC1860.10629786261287004No Hit
CCTCTTACGTCATCCCCACCTTCCAGTGGGGTTTGTGTCAGTTCCTGAGC1800.10286889930277747No Hit
TCGTAGACGTCATCCCCACCTTCCAGTGGGGTTTGTGTCAGTTCCTGAGC1760.10058292376271573No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)