FastQCFastQC Report
Wed 12 Jan 2022
000000000-JNBDR_l01_n02_HW6_51_v2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-JNBDR_l01_n02_HW6_51_v2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences190612
Sequences flagged as poor quality0
Sequence length301
%GC56

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGCCACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC5651329.64818584349359No Hit
GTCAGGACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC4344822.79394791513651No Hit
CCTCTTACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC122116.4062073741422365No Hit
TCGTAGACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC106685.596709546093635No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT28711.506201078630936No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT28021.47000188865339No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT24571.28900593876566No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT21411.1232241411873334No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT19841.0408578683398737No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT19751.0361362348645415No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTACCTT12450.6531592974209388No Hit
TCGTAGACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT10940.5739407802237005No Hit
AAGGCCACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT10590.5555788722640757No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA10260.5382662161878581No Hit
TCGTAGACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT8550.4485551801565484No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT7860.4123559901790024No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA7860.4123559901790024No Hit
GTCAGGACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT6680.3504501290579816No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT5600.2937905273539966No Hit
AAGGCCACGTCATCCCCACCTTCCTCCAGTTTATCACTGGCAGTCTCCTT5470.28697039011185027No Hit
CCTCTTACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT5180.27175623780244684No Hit
TCGTAGACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT5110.2680838562105219No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA4650.2439510628921579No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTACCTT4140.21719513986527605No Hit
TCGTAGACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA3320.1741758126455837No Hit
AAGGCCACGTCATCCCCACCTTCCTCACAGTTTGCACTGGCAGTCTTGTT2750.14427213396848046No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTACCTT2650.13902587455144483No Hit
AAGGCCACGTCATCCCCACCTTCCAGTGGGGTTTGTGTCAGTTCCTGAGC2620.13745199672633412No Hit
GTCAGGACGTCATCCCCACCTTCCTCGCGGCTTATCACCGGCAGTCTCCC2460.12905798165907706No Hit
GTCAGGACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCC2130.11174532558285942No Hit
AACGCCACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC2070.10859756993263803No Hit
ACGGCCACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC2010.10544981428241663No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)