FastQCFastQC Report
Fri 11 Feb 2022
000000000-JNB4T_l01_n02_HW6_47_v2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-JNB4T_l01_n02_HW6_47_v2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences226913
Sequences flagged as poor quality0
Sequence length301
%GC58

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCAGGACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC6086826.8243776249047No Hit
AAGGCCACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC6006226.46917541084028No Hit
CCTCTTACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC134055.907550470885317No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT21700.9563136532503647No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT21290.9382450542719016No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT16790.7399311630448674No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT15870.6993869897273405No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGCTTATCACCGGCGGTTCCTTT13730.6050777170104842No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCATT13540.5967044638253428No Hit
AAGGCCACGTCATCCCCACCTTCCTCACAGTTTGCACTGGCAGTCTTGTT8380.3693045352183436No Hit
CCTCTTACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT7830.3450661707350394No Hit
AAGGCCACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT5330.23489178672002042No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA4690.2066871444121756No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT4370.19258482325825316No Hit
GTCAGGACGTCATCCCCACCTTCCTCTCGGCTTATCACCGGCAGTCCCCT4260.18773715036159233No Hit
ACGGCCACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC4210.18553366268129196No Hit
AAGGCCACGTCATCCCCACCTTCCTCCAGTTTATCACTGGCAGTCTCCTT3820.168346458774949No Hit
GCCAGGACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC3680.16217669327010792No Hit
CCTCTTACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT3510.15468483515708664No Hit
CCTCTTACGTCATCCCCACCTTCCTCTCTACTTGCGTAGGCAGTCTCACT3030.13353135342620298No Hit
AAGGCCACGTCATCCCCACCTTCCTCCGAGTTGACCCCGGCAGTCTCCTA3020.13309065589014293No Hit
GTCAGGACGTCATCCCCACCTTCCTCCAGTTTATCACTGGCAGTCTCCTT2700.11898833473622049No Hit
GTCAGGACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCAGTCTCCTT2640.11634414951986002No Hit
AACGCCACGTCATCCCCACCTTCCAGTGGGGTATGTGTCAGTTCCTGAGC2600.11458135937561972No Hit
CCTCTTACGTCATCCCCACCTTCCTCACAGTTTGCACTGGCAGTCTTGTT2460.10841159387077867No Hit
AAGGCCACGTCATCCCCACCTTCCTCTCAGTTTGCACTGGCAGTCTCGTT2340.10312322343805777No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)