Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content 000000000-JG8VC_l01_n01_CNV-RNAseq-1728-1 000000000-JG8VC_l01_n01_CNV-RNAseq-1728-1.fastq.gz Conventional base calls Sanger / Illumina 1.9 2598562.0 0.0 76.0 41.0 98.94179909222281 76.0 pass pass pass pass fail pass pass pass pass pass pass 000000000-JG8VC_l01_n01_CNV-RNAseq-1731-1 000000000-JG8VC_l01_n01_CNV-RNAseq-1731-1.fastq.gz Conventional base calls Sanger / Illumina 1.9 3984070.0 0.0 76.0 40.0 98.51111953102635 76.0 pass pass pass pass fail pass pass pass pass pass pass 000000000-JG8VC_l01_n01_CNV-RNAseq-1733-3 000000000-JG8VC_l01_n01_CNV-RNAseq-1733-3.fastq.gz Conventional base calls Sanger / Illumina 1.9 4088215.0 0.0 76.0 41.0 98.39955486358187 76.0 pass pass pass pass fail pass pass pass pass pass pass 000000000-JG8VC_l01_n01_CNV-RNAseq-1734-2 000000000-JG8VC_l01_n01_CNV-RNAseq-1734-2.fastq.gz Conventional base calls Sanger / Illumina 1.9 3205382.0 0.0 76.0 40.0 97.68326841429744 76.0 pass pass pass pass fail pass pass pass pass pass pass 000000000-JG8VC_l01_n01_undetermined 000000000-JG8VC_l01_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 974155.0 0.0 76.0 43.0 36.521259468526424 76.0 pass pass pass pass pass fail pass pass fail pass pass 000000000-JG8VC_l01_n02_CNV-RNAseq-1728-1 000000000-JG8VC_l01_n02_CNV-RNAseq-1728-1.fastq.gz Conventional base calls Sanger / Illumina 1.9 2598562.0 0.0 76.0 40.0 92.55302182304332 76.0 pass pass pass pass fail warn pass pass pass pass pass 000000000-JG8VC_l01_n02_CNV-RNAseq-1731-1 000000000-JG8VC_l01_n02_CNV-RNAseq-1731-1.fastq.gz Conventional base calls Sanger / Illumina 1.9 3984070.0 0.0 76.0 40.0 90.67084955526946 76.0 pass pass pass pass fail warn pass pass pass pass pass 000000000-JG8VC_l01_n02_CNV-RNAseq-1733-3 000000000-JG8VC_l01_n02_CNV-RNAseq-1733-3.fastq.gz Conventional base calls Sanger / Illumina 1.9 4088215.0 0.0 76.0 41.0 88.51479601785721 76.0 pass pass pass pass fail warn pass pass pass pass pass 000000000-JG8VC_l01_n02_CNV-RNAseq-1734-2 000000000-JG8VC_l01_n02_CNV-RNAseq-1734-2.fastq.gz Conventional base calls Sanger / Illumina 1.9 3205382.0 0.0 76.0 40.0 90.22373756718723 76.0 pass pass pass pass fail warn pass pass pass pass pass 000000000-JG8VC_l01_n02_undetermined 000000000-JG8VC_l01_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 974155.0 0.0 76.0 40.0 31.880006297814123 76.0 pass pass pass pass warn fail pass pass fail fail pass