FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24
Sequences flagged as poor quality0
Sequence length301
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG1354.166666666666664No Hit
CCCGAAGGGGACGAAAAATGGTTTTTAGAGAACGAGAAGACGGTTACGCA14.166666666666666No Hit
CGTCCGGGTATGTATATTGGCGACACCTCCGACGGCACGGGCCTGCACCA14.166666666666666No Hit
AATAGCAGGTTTAAGAGCCTCGATACGCTCAAAGTCAAAATAATCAGCGT14.166666666666666No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG14.166666666666666No Hit
AGGCCTGCTATGTACATCGGCGATACCGATGACGGGTCCGGCCTCCACCA14.166666666666666No Hit
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG14.166666666666666No Hit
GGCTTGGTCATTTAGAGGAAGTACGCAGCCGCTGTCTCTTATACACATCT14.166666666666666No Hit
AGCCCCGCGCTGTTTATCGGCGACATCGGCGTCAAGGGCTTGCACCACCT14.166666666666666No Hit
AGGCCGGGAATGTAAAACGGCCGAACGGGCCTCGGGGGCCGGAACAACCG14.166666666666666No Hit
AGACCTGGTATGTACATCGGCTCCACCGGTGTGCGCGGCCTGCACCACCT14.166666666666666No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTTGTAACAAGGTTTCCGTAGGTG14.166666666666666No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)