FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH85.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH85.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28
Sequences flagged as poor quality0
Sequence length301
%GC66

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCCTGGTATGTACATTGGGTCCACCGGTGAGCGCGGCCTGCTCCACCT13.571428571428571No Hit
AGACCAGCTATGTATATCGGCTCCACCGATTATCGCGGTATTATGCACTG13.571428571428571No Hit
AGGCCGGCGATGTATATCGGGCGGCTTCCATGGGGTCTGTCTCTTATACA13.571428571428571No Hit
CGCCCCGGCATGTACATCGGCGACACCGACGACGGATCGCGCCTGCACCA13.571428571428571No Hit
CGCCCGGGCATGTATATCGGCTCGACCGGCGTCCGCTGCCTCCACCCCCT13.571428571428571No Hit
AGCCCAGGTATGTATATTGGCAACACCTCCGACGGCACCGGCCTGCACCA13.571428571428571No Hit
AGCCCCGGGATGTACATCGGCGACACCTCGGACGGCACCGGCCTGCACCA13.571428571428571No Hit
CGACCAGGGATGTATATCGGCTCCACCGGTGAGCGCGGTCTCCACCACCT13.571428571428571No Hit
AGTCCTGGTATGTACATAGGGTCGACGGGCGTCCGCGGTCTCCACCACCT13.571428571428571No Hit
CGTCCTGGCATGTATATCGGCGACACCGACGACGGGTCGGGCCTGCATCA13.571428571428571No Hit
AGTCCGGGTATGTACATCGGCTCGACCGGTGTGCGCTGGCTGCATCATCT13.571428571428571No Hit
AGGCCGGGCATGTATATTTGCGATACCGACGACGGTTCGGGCCTGCATCA13.571428571428571No Hit
CGGCCGGGTATGTACATCGGCTCGACCGGGGAGCGCGGCCTCCACCACCT13.571428571428571No Hit
AGTCCTGCTATGTACATTGGCAACACCGACGATGGCTCGGGCCTGCACCA13.571428571428571No Hit
CGGCCGGCGATGTATATCGGGTACACCGGTCTCGCCGCCCTGCACCACCT13.571428571428571No Hit
CGACCTGGCATGTATATCGGCTCCACCAGCGAGAGCGGGTTGCACCACCT13.571428571428571No Hit
AGGCCGGCGATGTATATTGGGTCGACCGACAGTCGAGGCGTCAACCACCT13.571428571428571No Hit
AGGCCTGGTATGTACATAGGCGACACCGACGACGGCACCGGCATCCATCA13.571428571428571No Hit
AGGCCAGCGATGTACATCGGCTCCACCGGGGCACGCGGTATGCACCATCT13.571428571428571No Hit
AGGCCGGGGATGTACATCGGCGACACCGACGACGGCTCGGGCCTGCACCA13.571428571428571No Hit
CGGCCGGCGATGTACATAGGCGATACCGACGACGGCTCGGGCCTCCACCA13.571428571428571No Hit
AGACCGGGGATGTATATCGGCTCCACCGGTGAGCGCGGCCTGCACCACCA13.571428571428571No Hit
CGACCGGGGATGTATATCGGCACCACCAGTTCCCGAGGTCTGCACCACCT13.571428571428571No Hit
AGACCGGCGATGTACATCGGCGACACGTCGGACGGCACGGGCCTGCACCA13.571428571428571No Hit
AGTCCCGGAATGTACATCGGCGACACCGACGACGGCTCGGGCCTCCACCA13.571428571428571No Hit
CGCCCGGGCATGTACATAGGCGATACCGACGACGGGTCGGGCCTCCACCA13.571428571428571No Hit
CGACCCGCAATGTATATAGGCGACACCGACGACGGCTCGGGCCTCCACCA13.571428571428571No Hit
AGGCCTGGTATGTACATCGGGCGGCCTTCCCGGGGTCTGTCTCTTATACA13.571428571428571No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)