FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH75.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH75.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length301
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCG26.25No Hit
AGGCCCGGGATGTATATCGGCGATACGTCGGATGGCACTGGCCTGCACCA13.125No Hit
CGCCCGGGGATGTATATCGGCGACACCGATGACGGCTCGGGGCTTCACCA13.125No Hit
AGGCCAGCAATGTATATCGGCGATACCGATGATGGATCGGGCCTGCACCA13.125No Hit
CGGCCCGGAATGTACATAGGCGACACCGATGACGGGTCCGGCCTCCACCA13.125No Hit
CGGCCTGCGATGTACATCGGCTCCACCGGCATCCGTGGCCTGCACCACAT13.125No Hit
AGACCCGGGATGTATATCGGGTCGACCGGAGAGCGCGGCCTGCACCACCT13.125No Hit
CGGCCCGCGATGTACATAGGCGACACCGACGACGGCTCCGGCCTGCACCA13.125No Hit
AGGCCAGGGATGTACATCGGCGACACGTCCGACGGCACCGGCCTGCACCA13.125No Hit
CGTCCGGCTATGTATATTGGGTCCACCGGTGAGCGAGGCCTGCACCACTT13.125No Hit
AGGCCAGCAATGTACATCGGGTCCACGGACATCCGCGGCCTGCTGCACCT13.125No Hit
GGCTTGGTCATTTAGAGGAAGTACGCAGCGCTGTCTCTATACACATCTCC13.125No Hit
CACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGCCGT13.125No Hit
CGACCGGGTATGTACATTGGCGACACCGACGACGGGTCGGGCCTCCACCA13.125No Hit
AGACCAGGCATGTACATTGGCGACACCGACGACCGGTCGGTCCTCCACCA13.125No Hit
CGCCCGGCTATGTACATCGGCAGCACCGATCAGCGCGGTCTCCATCACCT13.125No Hit
AGGCCCGCTATGTACATTGGCGACACCGACGACGGCTCCGGCCTCCACCA13.125No Hit
AGGCCTGGGATGTACATCGGCGATACGGGTATCAAGGGTCTCCACCACCT13.125No Hit
CGGCCAGGCATGTACATCGGCTCGACCGGCGACCGCGGCCTGCACCACAT13.125No Hit
AGCCCGGCGATGTACATTGGCGATACCGGTTTCAAGGGCAGGAAGCATTT13.125No Hit
CGGCCCGGAATGTATATTGGCGACACCGACGACGGTTCCGGCCTCCACCA13.125No Hit
CGGCTGCGTTCTTCACCGAGCCCACGAGACACTCACTGATCTCGTATGCC13.125No Hit
AGACCGGCAATGTACATCGGCGATACCGATGACGGCTCCGGTCTGCACCA13.125No Hit
CGCCCCGCAATGTATATCGGTTCGACCGGTCCGCGCGGCCTGATGCACTG13.125No Hit
AGACCGGGAATGTACATCGGCTCCACCGGCGAGCGCTGCCTCCTCCACCT13.125No Hit
AGGCCGGCGATGTATATCGGCGACACCGACGACGGGTCGGGGCTCCACCA13.125No Hit
AGGCCTGCGATGTACATCGGGTCCACCGGTGAGCGCGCTCTGCACCACCT13.125No Hit
CGTCCGGGAATGTACATTGGCGATACCGCCGACGGATCGGGCCTCCACCA13.125No Hit
AGTCCTGGGATGTATATCGGTCCGGTGGACTACACGGCGTCTGTCTCTTA13.125No Hit
CGTCCGGGGATGTATATCGGCGACACCGACGACGGATCGGGCCTGCACCA13.125No Hit
AGTCCTGGAATGTACATCGGCGATACCAAGACGGATCGGGCCATCACCAC13.125No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)