FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH74.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH74.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35
Sequences flagged as poor quality0
Sequence length301
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGCAATGTACATTGGCGACACCGCCGACGGCTCGGGCCTCCACCA12.857142857142857No Hit
CGACCGGCCATGTATATCGGCGACACCGACGACGGCTCGGGTCTGCACCA12.857142857142857No Hit
AGACCGGGGATGTACATCGGCGACACCGACGACGGGTCGGGCCTGCATCA12.857142857142857No Hit
CGGCCGGGAATGTACATCGGCGATACAGACGACGGTAGGGGCCTGCATCA12.857142857142857No Hit
AGTCCGGGGATGTACATTGGGTCCACCGGCCCACGCGGGCTGCACCACCT12.857142857142857No Hit
GGCTTGGTCATTTAGAGGAAGTACGCAGCCGCTGTCCTCTTATACACATC12.857142857142857No Hit
CGCCCGGCCATGTATATCGGCGACACCGACGACGGGTCGGGCCTGCACCA12.857142857142857No Hit
AGCCCTGGGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA12.857142857142857No Hit
CGGCCTGGAATGTACATTGGCGACACCTCGGATGGCACCGGCCTGCACCA12.857142857142857No Hit
AGTCCCGGGATGTACATTGGTGACACCGACGATGGGTCTGGCCTGCACCA12.857142857142857No Hit
AGTCCTGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA12.857142857142857No Hit
AGCCCTGGCATGTACATCGGCGACACCGACGACGGGTCCGGCCTCCACCA12.857142857142857No Hit
AGGCCTGCGATGTACATCGGCGACACCGACGACGGGTCGGGCCTGCACCA12.857142857142857No Hit
AGCCCTGGGATGTATATCGGCGATACCGACGACGGCACCGGTCTGCACCA12.857142857142857No Hit
CGGCTGCGTTCTTCATCGATCCGAGCCCACGAGACACGCTTCTATCTCGT12.857142857142857No Hit
CGCCCCGCGATGTACATCGGCGACACCGACGACGGCTCGGGCCTGCACCA12.857142857142857No Hit
AGGCCTGCAATGTATATCGGCGATACCGGCCTCAAAGGCCTGCACCACCT12.857142857142857No Hit
AGGCCCGGGATGTATATTGGCGACACCGACGACGGGTCGGGCTTGCACCA12.857142857142857No Hit
AGGCCTGGAATGTATATCGGCGACACCGACGACGGATCGGGCCTCCACCA12.857142857142857No Hit
AGACCTGCGATGTACATTGGCGACACCGACGATGGTTCCGGCCTGCACCA12.857142857142857No Hit
CGTCCGGGGATGTACATCGGGCGGTTTTAACGGCGTCTGTCTCTTATACA12.857142857142857No Hit
CGCCCGGCTATGTATATTGGCAACACCGACGACGGCTCTGGCCTGCACCA12.857142857142857No Hit
AGTCCCGGAATGTACATCGGCGACACCGACGACGGGTCGGGCCTGCATCA12.857142857142857No Hit
AGGCCGGCTATGTACATCGGCGATACCGACGACGGCTCCGGGCACCATCA12.857142857142857No Hit
CGGCCGGGCATGTACATCGGCGCCACGTCCGACCGCACCGGGCTGCACCA12.857142857142857No Hit
AGGCCAGGGATGTATATCGGCGATACCGACGACGGATCGGGCCTCCACCA12.857142857142857No Hit
CGGCCCGGGATGTACATCGGGCGGATTGCCTGGGGTCTGTCTCTTATACA12.857142857142857No Hit
AGGCCGGGGATGTATATCGGCGACACCGACGACGGCTCCGGCCTCCACCA12.857142857142857No Hit
CGTCCAGGGATGTATATCGGCAACACCGACGATGGGTCGGGCCTGCACCA12.857142857142857No Hit
CGGCCTGCTATGTACATAGGCGATACCGACGACGGATCGGGCCTCCACCA12.857142857142857No Hit
AGACCGGGGATGTATATCGGCGACACCGACGACGGCTCGGGCCTCCACCA12.857142857142857No Hit
AGGCCGGGAATGTATATAGGCGACACCGACGACGGGTCGGGCCTGCATCA12.857142857142857No Hit
CGCCCCGGGATGTATATCGGCGACACCTCGGACGGCACCGGCCTGCATCA12.857142857142857No Hit
CGCCCGGCGATGTATATCGGCGATACCGACGACGGGTCGGGCCTCCACCA12.857142857142857No Hit
AGACCAGCCATGTACATCGGCGACACCTCCGACGGCACCGGCCTGCACCA12.857142857142857No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)