FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH63.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH63.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40
Sequences flagged as poor quality0
Sequence length301
%GC65

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCCCAGCAATGTATATCGGCTCCACCGGAGAGCGCGGCCTGCACCACCT25.0No Hit
CGGCCGGGAATGTACATTGGGTCGACGGGGGAGCGCGGCCTGCACCACCT12.5No Hit
AGGCCCGGGATGTACATTGGCGACACCGACGATGGTTCGGGCCTGCATCA12.5No Hit
AGGCCGGGTATGTACATAGGCGACACCGACGACGGATCGGGCCTCCACCA12.5No Hit
AGCCCGGCTATGTATATTGGGAGCACCGGCCCCACCGGTCTGCACCACCG12.5No Hit
AGACCAGGGATGTACATCGGCGACACCGACGACGGGTCGGGCCTCCACCA12.5No Hit
AGGCCGGCGATGTACATAGGCGACACGTCCGATGGCACCGGCCTGCACCC12.5No Hit
CGACCGGGTATGTACATTGGCGATACCGACGACGGATCGGGCCTCCACTA12.5No Hit
AGGCCCGGGATGGATATCGGCGACACCGACGACGGCAGCGGCCTGCACCA12.5No Hit
AGGCCTGGGATGTACATCGGCGACACCGACGACGGCTCGGGCCTCCACCA12.5No Hit
AGGCCCGGCATGTATATCGGCGACACCGACGATGGGTCGGGCCTACACCA12.5No Hit
AGACCCGGGATGTATATTGGCGACACCGACGATGGCTCGGGCCTGCACCA12.5No Hit
CTCGGCCGGGGATGTATATCGGCGATACCGGCCTCAAAGGCCTGCACCAC12.5No Hit
CGGCCGGGGATGTACATCGGCGACACCGATGACGGCTCGGGCCTGCCTCA12.5No Hit
AGACCAGGCATGTACATTGGCGACACCGACGACGGCACGGGCCTGCACCA12.5No Hit
AGGCCGGGGATGTACATAGGCGACACCGACGACGGCACCGGCCAGCACCA12.5No Hit
AGGCCCGGTATGTACATCGGTTCGACCGGTCCGCGCGGCCTGATGCACTG12.5No Hit
CGGCCGGGTATGTACATCGGCGATACAGACGACGGCAGCGGCCTGCATCA12.5No Hit
CGTCCGGGTATGTATATCGGCGCCACCGACGAGGGGGGGGGGCTGCACTA12.5No Hit
AGACCGGGAATGTACATCGGCGATACCGGTGTCGGAGGAGTCCAGCATTA12.5No Hit
AGGCCAGCCATGTATATCGGCGATACTGACGACGGATCGGGCCTGCACCA12.5No Hit
AGGCCCGGGATGTATATTGGCGACACCGACGACGGCACCGGCCTGCACCA12.5No Hit
CGTCCGGGGATGTATATCGGCTCCACCGGCGAGCGCGGCCTGCACCACCT12.5No Hit
CGGCCAGGAATGTATATCGGCGACACCGACGATGGCTCCGGCCTGCACCA12.5No Hit
AGGCCGGCCATGTATATTGGCTCCACCGGTGAACGCGGCCTGCACCACCT12.5No Hit
CGGCCAGCGATGTACATCGGCGACACCGACGACGGTTCCGGCCTCCACCA12.5No Hit
AGGCCGGGTATGTATATCGGCGACACAGACGACGGCACCGGTCTGCACCA12.5No Hit
AGACCGGGGATGTACATAGGCGAGACCGACGACGGGGGCGGGCACCACCA12.5No Hit
AGACCAGCGATGTACATCGGCGACACCGACGACGGGTCGGGCCTGCACCA12.5No Hit
CGTCCGGCGATGTATATTGGCGACACCGACGACGGCGCGGGCCTGCACCA12.5No Hit
AGCCCCGCAATGTACATTGGCGACACCGACGGCGGCTCGGGTCTGCACCA12.5No Hit
CGACCTGCTATGTACATCGGCGACACCGACGACGGCTCGGGCCTGCACCA12.5No Hit
CGTCCTGGAATGTACATCGGCGACACCGACGATGGTTCGGGCCTGCACCA12.5No Hit
CGGCCGGGGATGTACATTGGCGATACCGACGACGGTTCCGGCCTCCACCA12.5No Hit
CGCCCTGGAATGTATATCGGCGATACCGACGACGGATCGGGCCTCCACCA12.5No Hit
AGCCCAGCGATGTATATCGGCTCGACGGACTCCCGCGGGCTGAAGCACTG12.5No Hit
CGTCCAGGGATGTACATTGGCTCGACCGGTGAGCGCGGCCGCCAGCACCG12.5No Hit
AGGCCTGGGATGTACATCGGCGGCACCGACGCCGGCGCGGGGCACCACCA12.5No Hit
AGGCCGGCGATGTACATCGGCGAGACCGGCGAGGGGGGGGGGCAGCACCA12.5No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)