FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH62.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH62.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length301
%GC64

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCAGGCATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA15.88235294117647No Hit
CGGCCAGCTATGTACATCGGCGATACAGACGACGGCACCGGCCTGCATCA15.88235294117647No Hit
AGTCCCGGGATGTACATTGGCGACACCGACGACGGTTCCGGCCTCCACCA15.88235294117647No Hit
CGCCCAGGCATGTACATTGGCGACACCGACTACGGTTCGGGCCTGCACCA15.88235294117647No Hit
AGGCCGGCGATGTATATAGGCGACACCGACGACGGGTCCGGCCTCCACCA15.88235294117647No Hit
AGTCCAGCCATGTATATTGGCGGCACGGACGAAAGGGCGCTGCATCATCT15.88235294117647No Hit
CGGCCGGCGATGTATATCGGCTCCACGGCGCCCCGCGGTCTCCACCACCT15.88235294117647No Hit
AGCCCAGGGATGTACATCGGCGACACCGCCTCGGGCGCCTGCCTCCACCA15.88235294117647No Hit
AGACCGGGAATGTATATCGGCGACACGGACGACGGAAGCGGGCTGCATCA15.88235294117647No Hit
AGACCAGGGATGTATATAGGCGACACCGACGACGGGTCGGGCCTCCACCA15.88235294117647No Hit
CGACCCGCAATGTACATCGGCGGTACCCACCCCGACACGCTCCTTCACCA15.88235294117647No Hit
CGTCCAGGCATGTACATCGGCGACACCGCCGACGGCTCCGGCCTGCACCA15.88235294117647No Hit
CGACCGGGCATGTACATCGGCGACACCGACGACCGTTCAGTCCTCCACCA15.88235294117647No Hit
AGGCCGGGTATGTATATCGGCGACACCGGCGACGGAGCCGGCCTCCACCA15.88235294117647No Hit
AGGCCTGGGATGTACATCGGCTCGACCGGGGAGCGCGGACTGCACCACCT15.88235294117647No Hit
AGACCGGGAATGTACATTGGCGACACCGAGGACGGCACGGGCCTGCACCA15.88235294117647No Hit
AGACCAGGCATGTATATTGGCGATACCGACGACGGGTCGGGCCTGCACCA15.88235294117647No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)