FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH60.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH60.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length301
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAAAAAGGATTCCGTAGGTG27.6923076923076925No Hit
AGGCCGGCAATGTACATCGGCGACACGGACGACGGGGGCGGGCTCCACCA13.8461538461538463No Hit
CGTCCCGCAATGTATATCGGCGATACCGACGACGGATCGGGCCTCCACCA13.8461538461538463No Hit
CGGCCTGCAATGTATATCGGCTCCACGGGTGAGCGCGGCCTGCACCACCT13.8461538461538463No Hit
AGGCCGGGGATGTACATCGGCGACACCGACGACGGCACCGGCCTGCACCA13.8461538461538463No Hit
AGGCCGGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA13.8461538461538463No Hit
CGTCCGGGGATGTATATCGGCGACACCGACGACGGCTCGGGCCTCCACCA13.8461538461538463No Hit
CGACCCGGGATGTACATCGGCTCGACCGGCGAGCGCGGTCTGCACCACCT13.8461538461538463No Hit
CGGCCGGGAATGTATATCGGCGACACCGACGACGGGTCAGGCCTGCACCA13.8461538461538463No Hit
CGGCCTGGTATGTACATTGGCGACACCGACGACGGGTCGGGCCTGCATCA13.8461538461538463No Hit
CGTCCGGGGATGTATATAGGCGATACAGACGACGGAACGGGCCTGCATCA13.8461538461538463No Hit
CGACCGGCCATGTACATCGGGTCGACCGGCGAGCGCGGTCTGCACCACCT13.8461538461538463No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG13.8461538461538463No Hit
AACGCGGCACAGAATGTTTATAGGTCTGTTGAACACGACCAGAAAACTGG13.8461538461538463No Hit
CGGCTGCGTTCTTCATCCGAGCCCACGAGACCTGCGTAGATCTCGTATGC13.8461538461538463No Hit
CGGCCGGGGATGTATATCGGCGATACGGACGACGGTAGCGGTCTGCACCA13.8461538461538463No Hit
CGGCCAGGTATGTATATCGGCGACACCTCGGACGGCACCGGGCTCCACCA13.8461538461538463No Hit
CGTCCCGCTATGTACATCGGCGACACCGACGACGGGTCCCGCCTGCACCA13.8461538461538463No Hit
AGGCCCGGGATGTACATCGGCTCCACTGACGACGGCTCGGGTCTGCACCA13.8461538461538463No Hit
AGGCCGGGTATGTACATCGGCGGCACCGACGAACAGGGGATGCACCACCT13.8461538461538463No Hit
AGGCCAGCGATGTACATCGGCGACACCGACGACGGCTCGGGCCTGCATCA13.8461538461538463No Hit
AGGCCAGGCATGTACATTGGCGATACCTCCGACGGCACGGGGCTGCACCA13.8461538461538463No Hit
CGTCCTGGAATGTACATCGGCGATACCGACGACGGGTCGGGCCTCCACCA13.8461538461538463No Hit
CGGCCGGCCATGTATATCGGCTCCACCGGTGAGGGCGGGCTGCACCACCT13.8461538461538463No Hit
AGGCCTGGAATGTACATCGGCGAGACAGACGACGGTAGCGGGCTGCATCA13.8461538461538463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)