FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH57.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH57.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41
Sequences flagged as poor quality0
Sequence length301
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG24.878048780487805No Hit
CGAAAGGGGATGTACATCGGCGAGACCGATTCGCGCGGCGGGATCCACTG12.4390243902439024No Hit
GGCTTGGTCATTTAGAGGAAGAACGCAGCCGCTGTCTCTTATACACATCT12.4390243902439024No Hit
TTCCATGCGGTGCACTTTATGCGGACACTTCCTCCAGGTAGCGTTGACCC12.4390243902439024No Hit
CGGCCAGGTATGTACATCGGCTCCACCGGTGTGCGCGGCCTGCACCACCT12.4390243902439024No Hit
AGCCCCGCCATGTACATCGGCGATACCGACGACAGATCGGGCCTCCACCA12.4390243902439024No Hit
CGACCTGCTATGTACATCGGCTCGACCGATTCGCGCGGCCTCCTGCACTT12.4390243902439024No Hit
CGTCCCGCTATGTACATCGGCTCGACCGGCCACCGCGGCCTGCACCACCT12.4390243902439024No Hit
TGGCCGGCGATGTACATCGGCGGCACCGGGCTCTCCTGCCTGCACCACCT12.4390243902439024No Hit
AGACCAGGGATGTACATTGGCGCCACCGACGACGGCTCGGGTCTGCACCA12.4390243902439024No Hit
AGTCCGGGAATGTACATTGGCGACACAGCCGACGGCTCCGGCCTCCACCA12.4390243902439024No Hit
AGACCGGCGATGTACATAGGCGATACCGACGACGGTTCCGGCCTCCACCA12.4390243902439024No Hit
AGGCCGGGGATGTACATCGGGCGGACGGCATGGCGGCGGCCCCACCAACA12.4390243902439024No Hit
AGTCCTGGGATGTACATCGGCGACACCGATGACGGCTCCGGGCTCCACCA12.4390243902439024No Hit
CGACCAGCAATGTACATCGGCGATACCGACGACGGATCGGGCCTCCACCA12.4390243902439024No Hit
AGTCCTGGGATGTACATTGTCTCGACCGACTCCCGCGGCCTCATGCACTG12.4390243902439024No Hit
AGGCCTGCGATGTATATCGGCTCGACCGGCGACCGCTGCCTGCACCCCCT12.4390243902439024No Hit
CGGCTGCGTTCTTCACCGAGCCCACGCTACACTCACTGATCTCGTATGCC12.4390243902439024No Hit
AGACCGGCGATGTACATCGGCTCGACCGATTCGCGCGGGCTCATGCACTA12.4390243902439024No Hit
AGTCCGGGAATGTATATCGGCGACACCGAGAAGCGTGGCCTGCACCACCT12.4390243902439024No Hit
CGGCCCGCTATGTACATCGGCGACACGGACGACGGCTCGGGCCTGCACCA12.4390243902439024No Hit
AGACCTGGGATGTACATCGGCGACACCGACGACGGTTCCGGCCTCCACCA12.4390243902439024No Hit
CGTCCCGCAATGTATATTGGCGACACCTCCGACGGCACGGGCCTGCACCA12.4390243902439024No Hit
CGGCCCGGCATGTACATCGGATCCACCGGTCCGACCGGGCTGCACCACTG12.4390243902439024No Hit
AGCCCGGGTATGTATATCGGCGACACCGACGACGGCTCGGGTCTCCACCA12.4390243902439024No Hit
GGCTTGGTCATTTAGAGGAAGTACGCAGCCGCTGTCTCTTATACACATCT12.4390243902439024No Hit
AGGCCTGGAATGTACATCGGCGATACCGACGACGGATCGGGCCTCCACCA12.4390243902439024No Hit
AGACCGGGAATGTATATCGGGTCGACCGACGCCCGCGGGATGAAGCACCG12.4390243902439024No Hit
CGGCCGGGTATGTACATCGGCTCGACCGGACTCCGGGGTCTTCACCACCT12.4390243902439024No Hit
CGGCCGGGAATGTATATCGGCGACACCGATGACGGCTCGGGGCTCCACCA12.4390243902439024No Hit
GCATGGAAATGAAGACGGCCATTAGCTGTACCATACTCAGGCACACAAAA12.4390243902439024No Hit
CGTCCTGGGATGTACATCGGCGACACCTCCGACGGCACCGGCCTCCACCA12.4390243902439024No Hit
TCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAGGCATGGGTGATG12.4390243902439024No Hit
AGTCCCGGCATGTATATCGGCGACACCTCCGACGGCACGGTCCTGCACCA12.4390243902439024No Hit
AGGCCGGGCATGTACATCGGCGACACCGACGACGGCTCGGGCCTGCACCA12.4390243902439024No Hit
CGTCCGGGCATGTACATCGGCGACACCGACGACGGGTCCGGCCTCCACCA12.4390243902439024No Hit
AGGCCAGGCATGTATATTGGCGATACCGACGACGGCTCGGGCCTCCACCA12.4390243902439024No Hit
CGCCCCGGAATGTACATAGGCGACACCGACGACGGGTCGGGCCTCCACCA12.4390243902439024No Hit
AGCCCGGCGATGTATATCGGCGACACCGACGACGGGTCCGGCCTCCACCA12.4390243902439024No Hit
AGGCCGGGGATGTACATCGGCTCGACCGATTCGCGCGGCCTCATCCACTT12.4390243902439024No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)