FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH53.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH53.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length301
%GC66

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCCAGCAATGTATATCGGGTCCACCGGTGAGCGCGGCCTGCATCACCT13.225806451612903No Hit
AGACCCGGAATGTACATCGGCGACACCGACGACGGCTCGGGTCTGCACCA13.225806451612903No Hit
AGGCCAGCTATGTATATCGGCGACACGTCCGACGGCACCGGCCTGCACCA13.225806451612903No Hit
CGGCCTGCTATGTACATCGGCGACACCTCCGACGGCACCGGCCTGCACCA13.225806451612903No Hit
CGACCTGGGATGTACATCGGTGACACCGACGAGGGGTCGCTCCTGCATCA13.225806451612903No Hit
CGGCCAGGGATGTATATCGGCGCCACCGACGACCGCTGCCTCATGCACCA13.225806451612903No Hit
AGCCCTGGCATGTACATCGGCGACACGTCCGACGGTACCGGCTTGCACCA13.225806451612903No Hit
CGTCCAGGCATGTACATCGGCTCGACCGGCGCGCGCGGCGTCATCCACCG13.225806451612903No Hit
AGGCCCGCCATGTACATTGGCGACACCGACGCCGGCTCCGGCCTCCACCA13.225806451612903No Hit
CGGCCTGCCATGTACATCGGCGGCACCGACGACAATGCTCTGCATCACCT13.225806451612903No Hit
AGGCCTGGGATGTATATCGGCGGCACCGATGAGCGGGCGCTCCATCACCT13.225806451612903No Hit
CGGCCCGCGATGTATATTGGCGACACCGCCGACGGCTTGGGCCTCCACCA13.225806451612903No Hit
CGGCCTGGAATGTACATCGGCGACACCGACGAGGGTTCCGTCCTCCACCA13.225806451612903No Hit
AGACCTGGTATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA13.225806451612903No Hit
CGGCCTGGTATGTATATTGGCTCGACCGGATAGCGTGGTCTGCACCACCT13.225806451612903No Hit
AGGCCGGGCATGTACATCGGCGACACCGACGACGGCTCGGTTCTGCACCA13.225806451612903No Hit
CGGCCTGCCATGTATATAGGCGACACCTCCGACGGCACGGGCCTGCACCA13.225806451612903No Hit
AGTCCAGGCATGTATATCGGCGACACCAGCGACGGTTCGGGCCTCCACCA13.225806451612903No Hit
AGCCCTGGTATGTACATCGGCGACACCTCCTCCGGCACCCGCCTGCACCA13.225806451612903No Hit
CGACCGGCGATGTATATTGGGTCGACCGACAGCAAGGGCCTCACCCACCT13.225806451612903No Hit
CGACCCGGGATGTATATCGGCTCCACCGGCCCAGCCGGCTTGCACCACTT13.225806451612903No Hit
AGCCCCGGTATGTATATCGGCTACACCTCGGATCGCGCCGTCCTCCACCC13.225806451612903No Hit
AGCCCTGCCATGTACATCGGCGACACCGACGACGGTTCCGGCCTCCACCA13.225806451612903No Hit
AGTCCGGGAATGTATATAGGCGACACCTCCGACGGCACGGGCCTGCACCA13.225806451612903No Hit
AGTCCGGGTATGTACATCGGCGGCACCGACGACAACGCGCTGCACCATCT13.225806451612903No Hit
CGTCCGGCGATGTATATCGGCGACACCGCCGACGGCTCGGGCCTGCACCA13.225806451612903No Hit
AGGCCCGCAATGTACATTGGCGACACCTCGGATGGCACCCTCCTGCACCA13.225806451612903No Hit
CGACCTGCGATGTATATCGGCGACACCGACGACGGCTCGGGGCTGCACCT13.225806451612903No Hit
AGCCCGGCGATGTACATCGGCGACACCGACGACGGGTCCGGCCTCCACCA13.225806451612903No Hit
AGGCCGGGGATGTACATCGGCGACACCGCTGAAAGCACCGGTTTGCACCA13.225806451612903No Hit
AGTCCGGGAATGTACATCGGCTCGACCGGCGAGCGCGGTTTGCACCACCT13.225806451612903No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)