FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH42.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH42.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36
Sequences flagged as poor quality0
Sequence length301
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGACCTGGGATGTACATAGGCGACACCGATGACGGCTCGGGTCTGCACCA12.7777777777777777No Hit
GGCTTGGTCATTTAGAGGAAGAACGCAGCCGCTGTCTCTTATACACATCT12.7777777777777777No Hit
CGGCCAGGCATGTACATCGGCTCGACCGGAGAGCGCGGGCTGCACCACCT12.7777777777777777No Hit
CGGCCTGCCATGTATATAGGCTCGACGGGCCCGCGCGGCCTGCACCACCT12.7777777777777777No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG12.7777777777777777No Hit
AGTCCCGGGATGTATATCGGCGACACCGACGACGGCTCGGGCCTCCCACA12.7777777777777777No Hit
AGGCCCGCGATGTATATCGGCTCGACCGACTCGCGCGGCCGCCTGCACCG12.7777777777777777No Hit
AGACCAGGCATGTATATCGGGCGGCCTTCATGGCGTCTGCCTCTTATACA12.7777777777777777No Hit
AGTCCAGGGATGTATATAGGCTCGACCGATTCGCGCGGCCTCATGCACCG12.7777777777777777No Hit
AGACCTGGCATGTATATCGGCTCCACCGGCGAGCGCGGACTGCACCACCT12.7777777777777777No Hit
AGGCCTGCCATGTACATCGGCGACACCGACGACGGCTCCGGCCTGCACCA12.7777777777777777No Hit
AGTCCTGGGATGTACATTGGCAACACCGACGACGGCTCGGGCCTGCACCA12.7777777777777777No Hit
AGACCGGGGATGTACATCGGCTCCACCGGCGAGCGCGGCCTGCACCACCT12.7777777777777777No Hit
AGACCTGGAATGTACATCGGCGGCACCGACGAGAAGGCCATGCACCACCT12.7777777777777777No Hit
GGCTTGGTCATTTAGAGGAAGTACGCAGCCGCTGTCTCTTATACACGTCT12.7777777777777777No Hit
AGGCCTGCAATGTATATCGGCGACACCGACGACGGGTCGGGCCTGCATCA12.7777777777777777No Hit
CGGCCGGGGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA12.7777777777777777No Hit
AGGCCGGGCATGTATATCGGGTCCACCGGCGAGCGCGGCCTGCACCATCT12.7777777777777777No Hit
CGTCCTGGGATGTACATTGGCTCGACCGGCGAGCGCGGCCTGCACCACCT12.7777777777777777No Hit
AGACCGGGTATGTATATCGGCGACACGTCCGACGGCACCGGCCTGCATCA12.7777777777777777No Hit
AGACCGGCCATGTATATCGGGAGGCTTTCACGGCGTCTGTCTCTTTACAC12.7777777777777777No Hit
AGTCCGGCTATGTATATAGGCGACACCGACGACGTCTCGGGCCTCCACCA12.7777777777777777No Hit
AGCCCGGGGATGTATATCGGCGACACGGCCGAGGGCGGCCGCCAGCATCT12.7777777777777777No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG12.7777777777777777No Hit
AGGCCCGGTATGTATATCGGATCCACCGACTCGCGCGGGCTCATGCATTG12.7777777777777777No Hit
CGTCCTGGGATGTATATTGGCGATACCGACGACGGATCGGGCATCCACTA12.7777777777777777No Hit
AGCCCGGGAATGTATATCGGCGACACCGACGACGGATCGGGCCTCCACCA12.7777777777777777No Hit
AGACCGGGTATGTATATAGGCGATACCGACGACGGATCGGGCTTCCACCA12.7777777777777777No Hit
CGACCCGGCATGTATATTGGCGACACCGACGATGGCTGCGGCATGCACCA12.7777777777777777No Hit
AGACCGGGTATGTATATCGGGCGGACTCCATGGCGTTTGTCTCTTATACA12.7777777777777777No Hit
AGGCCTGGGATGTACATCGGCGACACCGACGACGGGTCGGGCCTGCATCA12.7777777777777777No Hit
AGGCCTGGCATGTATATCGGCGACACCTACGACGGCTCCGGCCTGCACCA12.7777777777777777No Hit
CGGCCGGGAATGTACATCGGCGATACCGACGACGGATCGGGCCTCCATCA12.7777777777777777No Hit
CGACCGGCCATGTACATCGGCGACACCGCCGACGGCTCGGGCCTCCACCA12.7777777777777777No Hit
GGTTTGGTCGTTTAGAGGAAGAACGCAGCCGCTGTCTCTTATACACATCT12.7777777777777777No Hit
CGACCTGGAATGTATATCGGCTCGACCTGCGACGGCGGCCTGCACCACAA12.7777777777777777No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)