FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH39.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH39.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6
Sequences flagged as poor quality0
Sequence length301
%GC63

[OK]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCCCGCTATGTACATAGGCGACACCGACGACCGGGCCCGGCTCCACCA116.666666666666664No Hit
CGGCCCGCGATGTACATTGGCGACACCGACCACCCACCGTGCCTGCCCCT116.666666666666664No Hit
CGACCTGGCATGTACATCGGCGACACCGACGACGGCTCGGGCCTGCATCA116.666666666666664No Hit
AGGCCTGGGATGTACATCGGCGACACCGACGACGGCTCTGGCCTCCACCA116.666666666666664No Hit
AGACCGGGGATGTACATAGGCGACACCGACGACGGATCGGGCCTGCACCA116.666666666666664No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG116.666666666666664No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)