FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH35.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH35.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length301
%GC64

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGACCCGGTATGTATATTGGCGACACCGACGACGGGTCCGGCCTGCACCA13.7037037037037033No Hit
AGGCCAGGGATGTATATCGGCGACACCGACGACGGGTCGGGCCTGCACCA13.7037037037037033No Hit
AGCCCGGCGATGTACATTGGCAGAGCCAGGCGGCCTCCACGGCGTCTGTC13.7037037037037033No Hit
AGACCAGCGATGTATATTGGCGACACCTCCGATGGCACCGGCCTGCACCA13.7037037037037033No Hit
AGGCCGGGTATGTACATAGGGTCCACCGGCGAGCGCGGCCTGCACCACCT13.7037037037037033No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG13.7037037037037033No Hit
AGACCGGGGATGTACATCGGGCCGACGGACGAGCGGGGGCTGCACCACTG13.7037037037037033No Hit
AGACCAGGGATGTATATTGGCGACACCGACGACGGCTCGCTCCACCACCA13.7037037037037033No Hit
AGGCCCGGCATGTATATCGGCTGCACCGACGAACGCGCCTTCCACCACCT13.7037037037037033No Hit
CGTCCAGGTATGTACATCGGCTCCACCGGCGAGCGCGGGCTGCACCACCA13.7037037037037033No Hit
CGTCCCGCGATGTATATCGGCGACACCGACGACGGTTCAGGCCTCCACCA13.7037037037037033No Hit
CGACCTGCGATGTATATCGGCGATACCGACGACGGATCGGGCCTGCATCA13.7037037037037033No Hit
CGTCCGGGTATGTACATCGGCGACACCGACGACGGCTCGGGCCTCCACCA13.7037037037037033No Hit
AGGCCGGGGATGTATATTGGTTCGACCGGTCCGCGCGGCCCGCTGCACTG13.7037037037037033No Hit
AGGCCTGGGATGTACATCGGCTCCACCGGCGAGCGCGGCCGGCACCACCT13.7037037037037033No Hit
AGCCCGGCGATGTACCTCGGCGACACCGACGACGGATCGGGCCTCCACCA13.7037037037037033No Hit
AGGCCAGCCATGTACATCGGCTCGACCGACTCGGCCGGGCTGCAGCACCT13.7037037037037033No Hit
AGGCCCGGAATGTACATAGGCACGACTGGGCCGCGTGGGCTGCACCATTT13.7037037037037033No Hit
CGGCCGGGTATGTTACATAGGTGACACCGACGATGGGTCTGGCCTGCACC13.7037037037037033No Hit
CGGCCTGCGATGTACATCGGCGACACCGACGACGGCTCCGGCCTGCACCA13.7037037037037033No Hit
CGGCCAGCTATGTACATTGGCTCGACCGGCGAGCGTGGTCTGCACCACCT13.7037037037037033No Hit
AGTCCCGGGATGTACATCGGCGACACCTCCGACGGCACCGGCCTGCATCA13.7037037037037033No Hit
CGGCCGGCGATGTACATCGGCGACACCGACGACGGCACCGGCCTCCACCA13.7037037037037033No Hit
AGGCCGGCTATGTACATTGGCTCCACCTGCGAGCGCGGCCTGCACCACCT13.7037037037037033No Hit
CGGCCGGGAATGTATATTGGCGGCACCGACGAGCGGGCCCTGCATCATCT13.7037037037037033No Hit
AGTCCCGGAATGTACATCGGCGACACTGACGACGGCTCGGGCCTGCATCA13.7037037037037033No Hit
AGGCCGGGGATGTACATCGGCGACACGGACGACGGGTCGGGCCTGCACCA13.7037037037037033No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)