FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH29.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH29.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38
Sequences flagged as poor quality0
Sequence length301
%GC65

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCCTGGGATGTACATCGGCTCGACCGGTCCCGCCGGGCTCCACCACAT12.631578947368421No Hit
CGTCCAGGGATGTATATCGGCTCCACCGGGCCGCGCGGTCTGCACCACCT12.631578947368421No Hit
CGGCCTGCTATGTACATCGGCTCCACCGGTGAGCGCGGCCTGCACCACCT12.631578947368421No Hit
AGGCCCGGGATGTACATCGGCGACACCTCCGACGGCACCGGCCTGCACCA12.631578947368421No Hit
CGTCCAGGGATGTACATCGGCTCGACCGGTTAGCGTGGTCTCCAGCACCG12.631578947368421No Hit
CGGCCCGGCATGTACATTGGCTCGACCGACAGCCGGGGCGTCAACCACCT12.631578947368421No Hit
GAGTGTCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATC12.631578947368421No Hit
CGGCCGGGAATGTACATTGGCGATACCGACGACGGTTCCGGCCTCCACCA12.631578947368421No Hit
GGCTTGGTCATTTAGCGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG12.631578947368421No Hit
CGACCTGGCATGTACATCGGCTCCACCGGCCTCGGCTCGCTTCTCCACCA12.631578947368421No Hit
AGCCCGGGGATGTACATTGGGTCCGTCGCCGAGCCGGGACTGCACCACCT12.631578947368421No Hit
CGACCAGGTATGTACATCGGCGCGACGGACGCCAGGGCGGGCCTGCACCA12.631578947368421No Hit
CGTCCCGGCATGTATATCGGCGACACCGACGACGGCTCGGTCCTCCACCA12.631578947368421No Hit
AGCCCCGCGATGTATATCGGCGACACCGACGATGGCTCCGGCCTGCATCA12.631578947368421No Hit
CGTCCTGGGATGTACATCGGCGATACCTCCGACGGTACGGGCCTGCACCA12.631578947368421No Hit
AGCCCGGCTATGTATATCGGCGAGACGGACGGCGGCTCGGTTCTGCACTA12.631578947368421No Hit
CGACCGGGGATGTATATTGGGTCGACGGGCCCCCGTGGTCTGCACCACCT12.631578947368421No Hit
CGCCCTGCTATGTACATCGGCGACACCGATGACGGATCGGGCCTGCACCA12.631578947368421No Hit
AGGCCCGGCATGTATATCGGCGGCACCGACGACCGCGCACTGCACCACCT12.631578947368421No Hit
CGTCCTGGGATGTATATCGGGTCGACCGGTGCGCGCGGCCTGCACCACCT12.631578947368421No Hit
GCCATGTCTAAATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGGTGGCAT12.631578947368421No Hit
CGTCCCGCGATGTATATCGGCTCCACCGGCGAGCGCGGCCTGCACCACCT12.631578947368421No Hit
CGGCCGGGGATGTATATCGGCTCCACGGGTGACCGCGGGCGGCACCACCT12.631578947368421No Hit
CGTCCTGCTATGTACATCGGCGATACCGATGATGGCTCGGGCCTCCCCCA12.631578947368421No Hit
AGACCCGGGATGTACATCGGCTCCACCGGCGAGCGCGGCCTGCACCACCT12.631578947368421No Hit
CGTCCGGGTATGTACATCGGCTCCACCGCCCCGCGCGGTCTCCTCCACCT12.631578947368421No Hit
CGCCCTGGAATGTATATCGGCGACACCGCCGACGGCTCGGGCCTCCACCA12.631578947368421No Hit
AGGCCGGGCATGTATATCGGCGACACCGCCGACGGCTCCGGCCTCCACCA12.631578947368421No Hit
AGTCCGGCAATGTATATAGGCGACACCGACGACGGATCGGGCCTCCACCA12.631578947368421No Hit
AGTCCGGGGATGTATATTGGCTCGACCGGCTAGCGCGGCCTGCACCACAT12.631578947368421No Hit
AGTCCTGGAATGTATATTGGGTCCACCGGTCCGCGTGGTCTGCACCACCT12.631578947368421No Hit
CGACCGGGCATGTACATCGGCGACACCGACGACGGCTCCGGCCTGCACCA12.631578947368421No Hit
CGGCCTGCCATGTATATCGGCGACACCGACGACGGATCGGGCCTCCACCA12.631578947368421No Hit
CGTCCAGCTATGTATATTGGGTCCACGGGCGAGCGCGGCCTGCACCACCT12.631578947368421No Hit
CGACCTGGAATGTATATCGGCAACACCGACTACGGCTCGGTCCTGCACCA12.631578947368421No Hit
AGACCGGGTATGTATATTGGCGACACCTCCTAGCGCGCAATCCACCACCT12.631578947368421No Hit
AGACCGGGTATGTACATAGGCTCGACCGATTCCGGCGGCCTCATGCACTG12.631578947368421No Hit
AGGCCCGGGATGTATATCGGCTCCACCGGCGCGCGCGGTCTGCACCACCG12.631578947368421No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)