FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH19.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH19.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length301
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG313.043478260869565No Hit
GGCTTGGTCATTTAGAGGAAGTACGCAGCCGCTGTCTCTTATACACATCT28.695652173913043No Hit
AGCCCCGCAATGTACATCGGTTCCACCGGTGAGCGGGGCCTGCACCACCT14.3478260869565215No Hit
CGGCCGGGCATGTACATTGGCGACACCTCCGACGGCACCGGCCTGCACCA14.3478260869565215No Hit
GGCTTGGTCATTTAAAGGAAGTAAAAATCATGACAAGGTTTCCATAAATA14.3478260869565215No Hit
AGGCCTGCGATGTATATCGGCGATGCGGGTATCAAGGGTCTCCACCACCT14.3478260869565215No Hit
CGACCGGCGATGTACATCGGCGACACCGACTACCGCGCGTACCTCCACCA14.3478260869565215No Hit
AGGCCCGGCATGGATATCGGCGACACCGGCGAGCGGGGCGGGCACCACCA14.3478260869565215No Hit
AGGCCGGGGATGTATATTGGCGGCACCGACGCCAACGCGCTGCACCACCT14.3478260869565215No Hit
CGCCCCGCGATGTACATTGGCTCGACGGGCCCGCGCGGTCTGCACCACCT14.3478260869565215No Hit
AGGCCAGCGATGTACATCGGCTCGACCGGTTCGCGCGGCCTCAAGCACTT14.3478260869565215No Hit
AGGCCAGCCATGTATATCGGCTCGACTGGAGAGCGTGGTCTGCACCACCT14.3478260869565215No Hit
AGGCCAGCCATGTACATAGGATCGACGGGCACCAAGGGCCTGCACCACCT14.3478260869565215No Hit
AGGCCCGGGATGTACATAGGCGACACCGACGACGGCTCGGGCCTGCATCA14.3478260869565215No Hit
AGCCCGGGTATGTACATAGGCGGCACCGACGACAGGACTATGCACCATCT14.3478260869565215No Hit
GGCTAGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG14.3478260869565215No Hit
AGCCCTGCAATGTATATCGGCTCGACTGGAGAGCGTGGCCTGCACCACCT14.3478260869565215No Hit
CGGCCTGGTATGTACATAGGGTCCACCGGCGAGCGCGGCCTGCTTCTCCT14.3478260869565215No Hit
CGGCCGGCCATGTATATCGGTTCCACCGGTGAGCGGGGCCTGCACCACCT14.3478260869565215No Hit
CGGCCTGGGATGTACATCGGCTACACCGGCGACGGGAGCGGGCTCCACCT14.3478260869565215No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)