FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH11.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH11.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40
Sequences flagged as poor quality0
Sequence length301
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTAACCGTAGGTG615.0No Hit
AGGCCGGCCATGTACATCGGCGGCACCGACGAGAACGCCATCCATCACCT12.5No Hit
CGACCAGCCATGTACATCGGCGACACGTCCGACGGCACCGGCCTGCACCA12.5No Hit
CGTCCCGCCATGTACATCGGCGATACCGACGACGGTTCCGTCCTCCACCA12.5No Hit
GGCTTGGTCATTTAGAGGAAGTAAACGTCGTACCAAGGTAACCGTAGGTG12.5No Hit
CGCCCGGCGATGTATATCGGGTCGACGTCCGCGCGCGGCCTGCATCATCT12.5No Hit
AGGCCAGCAATGTACATAGGCGATACCGACGATGGCTCGGGCCTCCACCA12.5No Hit
AGGCCTGGTATGTACATCGGCGACACCGCCGCCCGGGCCCTGCTTCACCA12.5No Hit
CGGCCGGGGATGTATATCGGCAACACCGACGACGGCTCGGGCCAGCACCA12.5No Hit
AGCCCTGCAATGTATATCGGCTAGACGGGGCAGCGGGGGCTTCACCACCT12.5No Hit
AGTCCGGCGATGTATATCGGCGACACCGACGACCGCTCGGCTCCGCGCCA12.5No Hit
GGCGTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTAACCGTAGGTG12.5No Hit
AGGCCGGGCATGTACATCGGCTCCACCGGGGATCGTGTTCTCCACCTCCT12.5No Hit
GGCTTGTCATTTAGAGGAGGTAAAAGTCGTAACAAGGTAACCGTAGGTGA12.5No Hit
CGTCCGGCTATGTACATAGGCGACACCGGCGCGAAAGGGTTGCTCCACTT12.5No Hit
AGGCCGGCCATGTACATCGGGTCGACCGACTCGCGCGGGCTCATGCACTG12.5No Hit
GGCGGGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCAACCGTAGGTG12.5No Hit
CGGCCAGCTATGTATATCGGGTCAGGAGGCTTGCACGGCGTCTGTCTCCT12.5No Hit
AGGCCGGCCATGTACATAGGCTCGACCGGAGAGCGCGGCCTGCACCACCT12.5No Hit
AGCCCAGGGATGTACATCGGCGACACCGACGACGGTTCAGTCCTCCACCA12.5No Hit
CGGCCCGCAATGTATATCGGCGACACCGACGACGGGTCGGGCCTGCATCA12.5No Hit
CGTCCCGGGATGTATATTGGCGACACCGACGACGGCTCGGGCCTGCACCA12.5No Hit
CGGCCCGCGATGTATATTGGCTCCACCGGTGACCGCGGACTTCACCATCT12.5No Hit
CGGCCGGGTATGTACATCGGCTCGACCGATGACCGCGGCCTCCACCACCT12.5No Hit
AGGCATGCGATGTACATTGGCGGCACGGACGAAAAGGCGCTGCATCATCT12.5No Hit
AGACCGGGAATGTATATCGGTGGCACGGACGAAAAGGCGATGCACCACCT12.5No Hit
AGACCGGCCATGTATATCGGCGACACCGATGACGGCACGGGCCTGCATCA12.5No Hit
CGGCCGGGGATGTATATTGGCTCGACCGGTGAGCGCGGCCTCCACCACCT12.5No Hit
CGGCCAGCAATGTATATCGGGTGGCTTGCACGGCGCCTGTCTCTTATCCA12.5No Hit
AGACCGGGAATGTATATTGGCGACACTGACGACGGCTCGGGCCTGCACCA12.5No Hit
AGGCCGGGAATGTATATAGGCGACACCGACGACGGCTCGGGCCTTCACCA12.5No Hit
AGACCGGCTATGTATATCGGCGATACCGACGACGGTTCCGGCCTCCACCA12.5No Hit
GGCTTGGTCATTTAGGGGAAGTAAAAGTCGTAACAAGGTAACCGTAGGTG12.5No Hit
AGGCCGGGTATGTACATCGGCGGCACGGACGAAAAGGCGCTGCATCATCT12.5No Hit
AGTCCAGCAATGTACATCGGCGCCACCGATGACGCCTGAGGCCTCCACCT12.5No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)