FastQCFastQC Report
Sat 23 Nov 2024
000000000-GNC2B_l01_n01_run2_repeat_GyrBATH10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_run2_repeat_GyrBATH10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34
Sequences flagged as poor quality0
Sequence length301
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCCAACCATGTACATCGGGAGGCCTTCACGGTGTCTGTCTCTTATACA12.941176470588235No Hit
AGGCCGGGTATGTATATTGGCGACACGGACGACGGGTCCGGCCTCCACCA12.941176470588235No Hit
GGGCCCGGAATGTACATTGGCGACACCGACGACGGCTCGGGCCTCCACCA12.941176470588235No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG12.941176470588235No Hit
CGACCGGGGATGTACATCGGCGATACCGACGACGGATCGGGCCTCCACCA12.941176470588235No Hit
CGACCTGCTATGTACATCGGCTCCACCGGACCAGCGGGGCTGCATCATCT12.941176470588235No Hit
CGACCGGGAATGCACATTGGGTCGACGGGGCCGCGAGGATTGCATCATCT12.941176470588235No Hit
AGCCCGGGGATGTACATCGGCTCCACCGGCCCGCGCGGCCTCCACCACCT12.941176470588235No Hit
AGTCCGGCGATGTATATTGGCTCCACCGGCCCGCGCGGCCTCCACCACCT12.941176470588235No Hit
AGGCCGGGGATGTACATAGGCTCGACAGGTCCGCGGGGCCTCCACCACCT12.941176470588235No Hit
AGACCTGGGATGTACATAGGCGACACCGACGACGGGTCGGGCCTGCATCA12.941176470588235No Hit
AGGCCGGGTATGTATATCGGCGATACCGACGACGGCTCGGGCCTGAATCA12.941176470588235No Hit
AGACCAGGCATGTATATCGGCGATACCGACGACGGATCGGGCCTCCACCG12.941176470588235No Hit
AGTCCCGCTATGTATATCGGCTCCACCGGCGAGCGCGGCCTGCACCACCT12.941176470588235No Hit
AGCCCTGGCATGTATATCGGCTCCACCGGCGCGCGCGAGCTGCACCACCT12.941176470588235No Hit
CGCCCAGGAATGTACATAGGCGGCACGGACGAAAAGGCGCTGCATCATCT12.941176470588235No Hit
AGACCGGGGATGTACATCGGCGACACCGACGACGGTACGGGCCTCCACCA12.941176470588235No Hit
AGGCCTGGAATGTATATCGGCGATACCGATGACGGCTCGGGCCTCCACCA12.941176470588235No Hit
AGTCCCGCTATGTACATCGGGCGGACTCAACGGGGTCTGTCTCTTCTACA12.941176470588235No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12.941176470588235No Hit
AGGCCTGGCATGTATATTGGGTCCACCGGTGAGCGCGGCCTGCACCACCT12.941176470588235No Hit
AGGCCTGCGATGTATATCGGGTCTCCGGCGGATTCCACGGTGTCTGTCTC12.941176470588235No Hit
AGTCCTGGGATGTATATCGGCTCCACCGGCGAGCGCGGCCTGCACCACCT12.941176470588235No Hit
AGCCCGGCGATGTACATTGGCGACACCGACGATGGCTCGGGCCTTCATCA12.941176470588235No Hit
AGTCCCTCCATGTATATCGGCTCGACGGGCGAGCGCGGGCTGCACCACCT12.941176470588235No Hit
CGGCCGGGGATGTATATCGGCGACACCGACGACGGCTCGGGCCTCCACCA12.941176470588235No Hit
AGTCCCGGGATGTACATCGGTTCGACCGACTCCCGCGGGCTGATGCACTG12.941176470588235No Hit
CGGCCAGGTATGTACATTGGCTCCACCGGCACCCGCGGCCTGCACCGCCT12.941176470588235No Hit
CGGCCGGGGATGTATATCGGCGACACCGACGCCCGCGGCCTCCTGCACCT12.941176470588235No Hit
AGCCCGGGTATGTACATTGGCGACACCGACGACGGCTCGGGCCACCACCA12.941176470588235No Hit
AGTCCTGCAATGTACATTGGCTCGACGGGGCCGCGAGGATTGCATCATCT12.941176470588235No Hit
AGCCCAGGCATGTATATCGGCTCCACCGACGCCCGCGCGCTGCACCACCT12.941176470588235No Hit
AGGCCGGCCATGTACATCGGCGGCATCGACGAGCGGGCGCTGCATCACCT12.941176470588235No Hit
CGGCCGGGAATGTACATTGGCGACATGGGCGATCGTGGCCTACACCACCT12.941176470588235No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)