FastQCFastQC Report
Wed 27 Nov 2024
000000000-GNC2B_l01_n01_micro_run2_repeat_GyrBATH10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GNC2B_l01_n01_micro_run2_repeat_GyrBATH10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61136
Sequences flagged as poor quality0
Sequence length301
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA2150.35167495420047107No Hit
CGGCCGGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1780.2911541481287621No Hit
AGGCCGGGGATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1470.24044752682543835No Hit
AGGCCTGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1290.21100497252028264No Hit
CGGCCGGGGATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1240.20282648521329494No Hit
AGGCCGGGTATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1240.20282648521329494No Hit
AGGCCGGGCATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1180.19301230044490972No Hit
AGGCCCGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1160.18974090552211464No Hit
AGGCCGGCGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1130.18483381313792202No Hit
AGGCCAGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1130.18483381313792202No Hit
AGGCCGGCGATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1120.18319811567652447No Hit
CGGCCGGGCATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1120.18319811567652447No Hit
AGGCCTGGGATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1110.18156241821512695No Hit
CGTCCGGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1100.1799267207537294No Hit
AGGCCGGGAATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1090.17829102329233185No Hit
CGGCCTGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1080.1766553258309343No Hit
AGGCCGGGTATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1020.16684114106254908No Hit
AGGCCGGGCATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA1000.163569746139754No Hit
AGGCCGGGAATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA980.16029835121695893No Hit
CGGCCAGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA960.15702695629416383No Hit
CGGCCGGGTATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA960.15702695629416383No Hit
AGGCCGGCTATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA940.15375556137136875No Hit
AGACCGGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA930.1521198639099712No Hit
CGGCCGGCGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA930.1521198639099712No Hit
AGTCCGGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA920.15048416644857365No Hit
AGGCCTGGCATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA900.14721277152577858No Hit
AGCCCGGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA890.14557707406438106No Hit
AGTCCTGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA880.1439413766029835No Hit
CGGCCCGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA880.1439413766029835No Hit
AGGCCGGCAATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA880.1439413766029835No Hit
AGGCCGGGGATGTACATAGGCGATACAGACGACGGTAGCGGTCTGCATCA880.1439413766029835No Hit
CGACCGGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA870.14230567914158598No Hit
AGGCCCGGGATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA850.13903428421879088No Hit
AGGCCTGGTATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA830.1357628892959958No Hit
CGGCCGGGCATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA820.13412719183459829No Hit
CGGCCGGGTATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA820.13412719183459829No Hit
CGGCCTGGGATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA810.13249149437320074No Hit
AGGCCAGGGATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA790.12922009945040563No Hit
AGGCCAGGAATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA760.12431300706621302No Hit
AGACCGGGTATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA750.12267730960481549No Hit
AGGCCCGGCATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA750.12267730960481549No Hit
CGCCCGGGGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA740.12104161214341795No Hit
AGGCCCGCGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA730.11940591468202041No Hit
AGTCCGGGGATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA730.11940591468202041No Hit
CGGCCAGGGATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA710.11613451975922534No Hit
AGGCCGGGGATGTACATTGGCGATACAGACGACGGTAGCGGTCTGCATCA710.11613451975922534No Hit
CGGCCCGGGATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA700.1144988222978278No Hit
AGGCCAGGCATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA690.11286312483643025No Hit
CGGCCTGGCATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA670.10959172991363518No Hit
AGGCCTGCGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA660.10795603245223764No Hit
AGGCCAGGTATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA650.10632033499084008No Hit
AGACCGGGGATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA650.10632033499084008No Hit
AGCCCGGGCATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA650.10632033499084008No Hit
CGGCCTGGTATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA650.10632033499084008No Hit
CGGCCGGCTATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA650.10632033499084008No Hit
CGGCCTGGAATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA640.10468463752944254No Hit
CGGCCGGCAATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA640.10468463752944254No Hit
CGCCCGGGGATGTATATCGGCGATACAGACGACGGTAGCGGTCTGCATCA630.103048940068045No Hit
AGTCCGGCGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA630.103048940068045No Hit
CGGCCGGGGATGTACATTGGCGATACAGACGACGGTAGCGGTCTGCATCA630.103048940068045No Hit
CGTCCGGCGATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA630.103048940068045No Hit
CGGCCCGGTATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA620.10141324260664747No Hit
AGGCCCGGTATGTACATCGGCGATACAGACGACGGTAGCGGTCTGCATCA620.10141324260664747No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)