FastQCFastQC Report
Fri 25 Oct 2024
000000000-GM647_l01_n01_P_HSD_ATH93.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GM647_l01_n01_P_HSD_ATH93.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13308
Sequences flagged as poor quality0
Sequence length301
%GC57

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCGGCTGATCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG850.6387135557559362No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG790.5936278929966937No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG760.5710850616170725No Hit
TTCCGGCTGATCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG760.5710850616170725No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG690.5184851217312894No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG680.510970844604749No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG660.49594229035166815No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG650.48842801322512774No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG630.4733994589720469No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG630.4733994589720469No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG620.4658851818455064No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG620.4658851818455064No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG610.458370904718966No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG590.44334235046588516No Hit
TTCCGGCTGATCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG590.44334235046588516No Hit
TTCCGGCTGATCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG570.4283137962128043No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG570.4283137962128043No Hit
TCCCGGCTGATCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG560.4207995190862639No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG550.4132852419597235No Hit
TCCCGGCTGATCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG550.4132852419597235No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG550.4132852419597235No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG550.4132852419597235No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG550.4132852419597235No Hit
TTCCGGCTGATCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG540.40577096483318303No Hit
TTCCGGCTGACCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG530.39825668770664263No Hit
TTCCGGCCGATCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG520.39074241058010223No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG520.39074241058010223No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG520.39074241058010223No Hit
TTCCGGCTGATCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG520.39074241058010223No Hit
TTCCGGCTGACCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG510.38322813345356177No Hit
TTCCGGCTGATCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG510.38322813345356177No Hit
TTCCGGCTGACCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG500.37571385632702137No Hit
TTCCGGCTGACCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG500.37571385632702137No Hit
TCCCGGCTGACCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG500.37571385632702137No Hit
TCCCGGCTGATCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG500.37571385632702137No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG500.37571385632702137No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG500.37571385632702137No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA490.3681995792004809No Hit
TCCCGGCCGATCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG480.36068530207394045No Hit
TCCCGGCTGATCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG480.36068530207394045No Hit
TCCCGGCTGACCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG480.36068530207394045No Hit
TTCCGGCCGATCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG470.35317102494740005No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG460.34565674782085964No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG460.34565674782085964No Hit
TTCCGGCTGACCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG450.3381424706943192No Hit
TTCCGGCTGACCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG450.3381424706943192No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG450.3381424706943192No Hit
TTCCGGCCGATCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG450.3381424706943192No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG440.3306281935677788No Hit
TCCCGGCTGACCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG430.3231139164412383No Hit
TTCCGGCTGATCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG430.3231139164412383No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG430.3231139164412383No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG420.3155996393146979No Hit
TTCCGGCTGATCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG420.3155996393146979No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA420.3155996393146979No Hit
TCCCGGCTGACCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG410.3080853621881575No Hit
TCCCGGCCGATCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG410.3080853621881575No Hit
TCCCGGCTGATCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG410.3080853621881575No Hit
TCCCGGCTGACCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG400.30057108506161706No Hit
TTCCGGCCGACCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG400.30057108506161706No Hit
TTCCGGCCGATCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG400.30057108506161706No Hit
TTCCGGCCGATCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG400.30057108506161706No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG400.30057108506161706No Hit
TTCCGGCTGACCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG390.29305680793507666No Hit
TCCCGGCCGACCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG390.29305680793507666No Hit
TCCCGGCTGACCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG380.28554253080853625No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCCGTG380.28554253080853625No Hit
TTCCGGCCGATCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG380.28554253080853625No Hit
TCCCGGCTGACCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG380.28554253080853625No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA380.28554253080853625No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA370.2780282536819958No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA370.2780282536819958No Hit
TTCCGGCCGATCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG370.2780282536819958No Hit
TTCCGGCCGACCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG370.2780282536819958No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCCGTG360.2705139765554554No Hit
TCCCGGCTGATCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG360.2705139765554554No Hit
TCCCGGCCGACCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG360.2705139765554554No Hit
TTCCGGCTGACCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG350.26299969942891493No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA350.26299969942891493No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA350.26299969942891493No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA340.2554854223023745No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA330.24797114517583407No Hit
TTCCGGCCGACCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG330.24797114517583407No Hit
TCCCGGCCGACCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG320.24045686804929364No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA320.24045686804929364No Hit
TTCCGGCCGACCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG320.24045686804929364No Hit
TTCCGGCCGACCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG320.24045686804929364No Hit
TCCCGGCCGATCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG320.24045686804929364No Hit
TCCCGGCCGACCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG320.24045686804929364No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA320.24045686804929364No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA320.24045686804929364No Hit
TCCCGGCTGATCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG320.24045686804929364No Hit
TTCCGGCCGACCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG320.24045686804929364No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA310.2329425909227532No Hit
TCCCGGCTGATCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG310.2329425909227532No Hit
TTCCGGCCGATCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG300.2254283137962128No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA300.2254283137962128No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA300.2254283137962128No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA290.21791403666967238No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA290.21791403666967238No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA290.21791403666967238No Hit
TCCCGGCCGATCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG290.21791403666967238No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA290.21791403666967238No Hit
TCCCGGCCGATCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG290.21791403666967238No Hit
TTCCGGCCGACCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG290.21791403666967238No Hit
TCCCGGCCGATCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG290.21791403666967238No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA290.21791403666967238No Hit
TCCCGGCCGACCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG280.21039975954313195No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA280.21039975954313195No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA280.21039975954313195No Hit
TCCCGGCCGATCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG280.21039975954313195No Hit
TCCCGGCCGACCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG280.21039975954313195No Hit
TCCCGGCTGACCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG270.20288548241659152No Hit
TCCCGGCCGACCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG270.20288548241659152No Hit
TCCCGGCCGACCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG270.20288548241659152No Hit
TCCCGGCCGATCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG270.20288548241659152No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA260.19537120529005111No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA260.19537120529005111No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA260.19537120529005111No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA260.19537120529005111No Hit
TTCCGGCCGATCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG260.19537120529005111No Hit
TTCCGGCCGACCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG250.18785692816351068No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA250.18785692816351068No Hit
TTCCGGCCGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT240.18034265103697023No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA230.17282837391042982No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA230.17282837391042982No Hit
TTCCGGCCGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT230.17282837391042982No Hit
TCCCGGCCGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT220.1653140967838894No Hit
TTCCGGCTGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC220.1653140967838894No Hit
TTCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT220.1653140967838894No Hit
TTCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA220.1653140967838894No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA200.15028554253080853No Hit
TCCCGGCTGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT200.15028554253080853No Hit
TTCCGGCCGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC190.14277126540426813No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA190.14277126540426813No Hit
TTCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC180.1352569882777277No Hit
TTCCGGCTGATCGTCTGATTGCCAATCCGGGTTGCTACCCGACCACGATG180.1352569882777277No Hit
TCCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT180.1352569882777277No Hit
TCCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT170.12774271115118724No Hit
TCCCGGCTGATCGTCTGATTGCCAATCCGGGTTGCTACCCGACCACGATG170.12774271115118724No Hit
TCCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT170.12774271115118724No Hit
TTCCGGCCGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC170.12774271115118724No Hit
TTCCGGCCGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT170.12774271115118724No Hit
TCCCGGCCGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT170.12774271115118724No Hit
TTCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT160.12022843402464682No Hit
TTCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT160.12022843402464682No Hit
TCCCGGCTGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC160.12022843402464682No Hit
TCCCGGCCGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT160.12022843402464682No Hit
TTCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT160.12022843402464682No Hit
TCCCGGCCGATCGTCTGATCGCCAATCCGGGTTGCTACCCGACCACGATG150.1127141568981064No Hit
TCCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT150.1127141568981064No Hit
TTCCGGCTGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT150.1127141568981064No Hit
TTCCGGCTGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC150.1127141568981064No Hit
TTCCGGCTGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG150.1127141568981064No Hit
TTCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG150.1127141568981064No Hit
TCCCGGCCGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT150.1127141568981064No Hit
TTCCGGCCGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC150.1127141568981064No Hit
TTCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG140.10519987977156597No Hit
TCCCGGCCGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG140.10519987977156597No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG140.10519987977156597No Hit
TTCCGGCTGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC140.10519987977156597No Hit
TCCCGGCCGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT140.10519987977156597No Hit
TTCCGGCCGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT140.10519987977156597No Hit
TTCCGGCCGATCGTCTGATTGCCAATCCGGGTTGCTACCCGACCACGATG140.10519987977156597No Hit
TCCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT140.10519987977156597No Hit
TTCCGGCTGACCGTCTGATTGCCAATCCGGGTTGCTACCCGACCACGATG140.10519987977156597No Hit
TTCCGGCTGATCGTCTGATCGCCAATCCGGGTTGCTACCCGACCACGATG140.10519987977156597No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)