FastQCFastQC Report
Fri 25 Oct 2024
000000000-GM647_l01_n01_P_HSD_ATH92.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GM647_l01_n01_P_HSD_ATH92.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13209
Sequences flagged as poor quality0
Sequence length301
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1030.7797713680066621No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA890.6737830267242032No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA870.6586418351124234No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA820.6207888560829737No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA790.598077068665304No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA790.598077068665304No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA790.598077068665304No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA690.5223711106064047No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA690.5223711106064047No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA670.5072299189946249No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA670.5072299189946249No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA670.5072299189946249No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA660.4996593231887349No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA650.492088727382845No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA640.48451813157695506No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA630.47694753577106513No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA630.47694753577106513No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA620.4693769399651752No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA600.4542357483533955No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA590.44666515254750555No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA570.43152396093572565No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA560.4239533651298357No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA560.4239533651298357No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA550.4163827693239458No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA520.39367098190627603No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA520.39367098190627603No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA520.39367098190627603No Hit
TTCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA500.3785297902944962No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA500.3785297902944962No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA470.3558180028768264No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA430.3255356196532667No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA430.3255356196532667No Hit
TTCCGGCTGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC410.31039442804148687No Hit
TTCCGGCTGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC350.2649708532061473No Hit
TTCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC320.24225906578847753No Hit
TTCCGGCCGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC290.21954727837080779No Hit
TTCCGGCTGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC280.21197668256491786No Hit
TCCCGGCCGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC270.20440608675902794No Hit
TCCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC260.19683549095313801No Hit
TCCCGGCTGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC260.19683549095313801No Hit
TCCCGGCTGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC260.19683549095313801No Hit
TTCCGGCTGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT260.19683549095313801No Hit
TTCCGGCTGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC250.1892648951472481No Hit
TTCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT240.18169429934135817No Hit
TCCCGGCTGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC240.18169429934135817No Hit
TTCCGGCTGACCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG240.18169429934135817No Hit
TTCCGGCCGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC240.18169429934135817No Hit
TTCCGGCTGATCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG240.18169429934135817No Hit
TCCCGGCTGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC230.17412370353546824No Hit
TTCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT230.17412370353546824No Hit
TTCCGGCCGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT230.17412370353546824No Hit
TTCCGGCTGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC220.16655310772957832No Hit
TTCCGGCCGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC220.16655310772957832No Hit
TTCCGGCCGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC210.1589825119236884No Hit
TCCCGGCTGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC210.1589825119236884No Hit
TCCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT210.1589825119236884No Hit
TTCCGGCTGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT200.15141191611779847No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG200.15141191611779847No Hit
TTCCGGCCGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT200.15141191611779847No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG200.15141191611779847No Hit
TTCCGGCTGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC200.15141191611779847No Hit
TCCCGGCCGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT200.15141191611779847No Hit
TTCCGGCCGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC190.14384132031190855No Hit
TTCCGGCTGATCGCCTGATTGCCAATCCTGGTTGCTATCCGACCACGATG190.14384132031190855No Hit
TTCCGGCTGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC190.14384132031190855No Hit
TCCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT190.14384132031190855No Hit
TTCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT190.14384132031190855No Hit
TTCCGGCTGACCGTCTGATTGCCAATCCTGGTTGCTATCCGACCACGATG190.14384132031190855No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCAGTG190.14384132031190855No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG180.13627072450601863No Hit
TCCCGGCTGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC180.13627072450601863No Hit
TTCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT180.13627072450601863No Hit
TCCCGGCTGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT180.13627072450601863No Hit
TTCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT180.13627072450601863No Hit
TCCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT180.13627072450601863No Hit
TTCCGGCTGACCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG180.13627072450601863No Hit
TTCCGGCCGATCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG180.13627072450601863No Hit
TCCCGGCTGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC180.13627072450601863No Hit
TTCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT180.13627072450601863No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCAGTG170.1287001287001287No Hit
TCCCGGCCGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC170.1287001287001287No Hit
TCCCGGCTGATCGCCTGATTGCCAATCCTGGTTGCTATCCGACCACGATG170.1287001287001287No Hit
TTCCGGCTGACCGTCTGATCGCCAGAAGTGCATGGACTTGCTGAAAATGT170.1287001287001287No Hit
TTCCGGCTGATCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG170.1287001287001287No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG170.1287001287001287No Hit
TCCCGGCCGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC170.1287001287001287No Hit
TTCCGGCTGATCGCCTGATCGCCAATCCTGGTTGCTATCCGACCACGATG170.1287001287001287No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG170.1287001287001287No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG170.1287001287001287No Hit
TCCCGGCCGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT170.1287001287001287No Hit
TCCCGGCCGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT170.1287001287001287No Hit
TTCCGGCCGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC160.12112953289423876No Hit
TCCCGGCCGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC160.12112953289423876No Hit
TCCCGGCTGATCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG160.12112953289423876No Hit
TCCCGGCCGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT160.12112953289423876No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG160.12112953289423876No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG160.12112953289423876No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCAGTG160.12112953289423876No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCAGTG160.12112953289423876No Hit
TCCCGGCCGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT160.12112953289423876No Hit
TCCCGGCCGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT160.12112953289423876No Hit
TTCCGGCCGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC160.12112953289423876No Hit
TTCCGGCTGATCGCCTGATCGCCAGAAGTGCATGGACTTGCTGAAAATGT160.12112953289423876No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG150.11355893708834887No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCAGTG150.11355893708834887No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG150.11355893708834887No Hit
TCCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT150.11355893708834887No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG150.11355893708834887No Hit
TCCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT150.11355893708834887No Hit
TTCCGGCTGATCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG150.11355893708834887No Hit
TTCCGGCCGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC150.11355893708834887No Hit
TCCCGGCTGACCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG150.11355893708834887No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG150.11355893708834887No Hit
TCCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT150.11355893708834887No Hit
TCCCGGCTGATCGCCTGATTGCCAGAAGTGCATGGACTTGCTGAAAATGT150.11355893708834887No Hit
TCCCGGCTGACCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG150.11355893708834887No Hit
TTCCGGCCGATCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG150.11355893708834887No Hit
TTCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT150.11355893708834887No Hit
TTCCGGCCGACCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG150.11355893708834887No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCAGTG140.10598834128245893No Hit
TTCCGGCTGACCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG140.10598834128245893No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG140.10598834128245893No Hit
TTCCGGCCGACCGTCTGATTGCCAGAAGTGCATGGACTTGCTGAAAATGT140.10598834128245893No Hit
TTCCGGCCGACCGTCTGATTGCCAATCCTGGTTGCTATCCGACCACGATG140.10598834128245893No Hit
TTCCGGCCGATCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG140.10598834128245893No Hit
TTCCGGCTGACCGCCTGATTGCCAATCCTGGTTGCTATCCGACCACGATG140.10598834128245893No Hit
TTCCGGCCGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT140.10598834128245893No Hit
TTCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG140.10598834128245893No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCAGTG140.10598834128245893No Hit
TCCCGGCTGACCGCCTGATTGCCAATCCTGGTTGCTATCCGACCACGATG140.10598834128245893No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG140.10598834128245893No Hit
TCCCGGCTGATCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG140.10598834128245893No Hit
TCCCGGCTGATCGTCTGATCGCCAACGCCGTCATCCTGTGGATCGGCCTG140.10598834128245893No Hit
TCCCGGCCGATCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG140.10598834128245893No Hit
TTCCGGCTGATCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG140.10598834128245893No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)