FastQCFastQC Report
Fri 25 Oct 2024
000000000-GM647_l01_n01_P_HSD_ATH89.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GM647_l01_n01_P_HSD_ATH89.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18196
Sequences flagged as poor quality0
Sequence length301
%GC56

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCGGCTGATCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG1460.8023741481644318No Hit
TTCCGGCTGATCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG1120.6155198944823038No Hit
TTCCGGCCGATCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG1050.5770499010771598No Hit
TCCCGGCTGACCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG1050.5770499010771598No Hit
TCCCGGCTGATCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG1020.5605627610463838No Hit
TTCCGGCTGACCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG1010.5550670477027919No Hit
TCCCGGCTGATCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG1000.5495713343591998No Hit
TTCCGGCTGACCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG1000.5495713343591998No Hit
TTCCGGCTGATCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG1000.5495713343591998No Hit
TTCCGGCTGACCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG960.5275884809848318No Hit
TTCCGGCTGACCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG960.5275884809848318No Hit
TCCCGGCTGACCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG960.5275884809848318No Hit
TTCCGGCTGATCGTCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG960.5275884809848318No Hit
TTCCGGCCGATCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG950.5220927676412399No Hit
TCCCGGCTGATCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG930.5111013409540559No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG920.5056056276104638No Hit
TTCCGGCTGATCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG900.49461420092327985No Hit
TCCCGGCTGATCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG900.49461420092327985No Hit
TTCCGGCTGATCGTCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG900.49461420092327985No Hit
TTCCGGCCGATCGTCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG890.48911848757968784No Hit
TTCCGGCCGACCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG880.48362277423609584No Hit
TTCCGGCCGATCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG870.47812706089250384No Hit
TCCCGGCTGACCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG860.4726313475489119No Hit
TCCCGGCTGACCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG820.45064849417454383No Hit
TTCCGGCTGACCGTCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG810.44515278083095183No Hit
TTCCGGCTGATCGCCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG810.44515278083095183No Hit
TCCCGGCTGACCGTCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG800.4396570674873599No Hit
TCCCGGCTGATCGCCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG800.4396570674873599No Hit
TCCCGGCTGACCGTCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG800.4396570674873599No Hit
TCCCGGCCGATCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG790.4341613541437679No Hit
TTCCGGCCGACCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG770.4231699274565839No Hit
TCCCGGCCGACCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG770.4231699274565839No Hit
TCCCGGCCGATCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG760.4176742141129918No Hit
TCCCGGCTGATCGTCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG730.4011870740822159No Hit
TCCCGGCCGATCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG710.3901956473950319No Hit
TCCCGGCTGACCGCCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG710.3901956473950319No Hit
TCCCGGCCGACCGTCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG700.3846999340514399No Hit
TTCCGGCCGATCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG700.3846999340514399No Hit
TTCCGGCTGATCGCCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG690.37920422070784787No Hit
TTCCGGCTGACCGCCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG690.37920422070784787No Hit
TTCCGGCCGACCGCCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG690.37920422070784787No Hit
TCCCGGCTGATCGTCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG680.37370850736425587No Hit
TTCCGGCCGATCGCCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG680.37370850736425587No Hit
TTCCGGCCGACCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG670.3682127940206639No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG650.35722136733347987No Hit
TCCCGGCCGATCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG640.35172565398988787No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG640.35172565398988787No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG640.35172565398988787No Hit
TTCCGGCTGACCGTCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG640.35172565398988787No Hit
TCCCGGCCGATCGTCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG630.3462299406462959No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG630.3462299406462959No Hit
TCCCGGCCGACCGCCTGATTGCCAATCCAGGTTGCTACCCGACCACGATG620.34073422730270386No Hit
TTCCGGCCGACCGTCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG620.34073422730270386No Hit
TTCCGGCCGACCGTCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG620.34073422730270386No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG620.34073422730270386No Hit
TCCCGGCCGACCGCCTGATCGCCAATCCAGGTTGCTACCCGACCACGATG620.34073422730270386No Hit
TTCCGGCTGACCGCCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG610.33523851395911186No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG610.33523851395911186No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG600.3297428006155199No Hit
TCCCGGCCGACCGCCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG600.3297428006155199No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG600.3297428006155199No Hit
TCCCGGCTGACCGCCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG590.3242470872719279No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG580.31875137392833586No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG580.31875137392833586No Hit
TCCCGGCCGACCGTCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG580.31875137392833586No Hit
TCCCGGCTGATCGCCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG570.3132556605847439No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG560.3077599472411519No Hit
TCCCGGCCGATCGCCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG550.3022642338975599No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG530.2912728072103759No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG530.2912728072103759No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG530.2912728072103759No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG520.2857770938667839No Hit
TCCCGGCCGACCGTCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG520.2857770938667839No Hit
TTCCGGCCGATCGCCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG520.2857770938667839No Hit
TTCCGGCCGATCGTCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG520.2857770938667839No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG510.2802813805231919No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG510.2802813805231919No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG510.2802813805231919No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG500.2747856671795999No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG500.2747856671795999No Hit
TCCCGGCCGACCGCCTGATTGCCAATCCGGGTTGCTATCCGACCACGATG490.2692899538360079No Hit
TTCCGGCCGACCGCCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG480.2637942404924159No Hit
TCCCGGCCGATCGTCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG470.25829852714882395No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG460.2528028138052319No Hit
TTCCGGCCGACCGTCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG460.2528028138052319No Hit
TCCCGGCCGATCGCCTGATCGCCAATCCGGGTTGCTATCCGACCACGATG430.23631567377445595No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG420.23081996043086392No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG420.23081996043086392No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG410.22532424708727192No Hit
TTCCGGCCGATCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG400.21982853374367994No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG400.21982853374367994No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG390.21433282040008794No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG370.20334139371290394No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG360.19784568036931194No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG350.19234996702571994No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG340.18685425368212794No Hit
TCCCGGCTGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG310.17036711365135193No Hit
TCCCGGCTGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG300.16487140030775996No Hit
TTCCGGCTGATCGTCTGATTGCCAACCCGGGCTGCTACCCGACCACGATG300.16487140030775996No Hit
TCCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG290.15937568696416793No Hit
TTCCGGCTGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG280.15387997362057595No Hit
TCCCGGCCGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG270.14838426027698395No Hit
TTCCGGCTGATCGCCTGATCGCCAACCCGGGCTGCTACCCGACCACGATG270.14838426027698395No Hit
TCCCGGCTGACCGTCTGATTGCCAACCCGGGCTGCTACCCGACCACGATG260.14288854693339195No Hit
TTCCGGCTGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG250.13739283358979995No Hit
TTCCGGCTGACCGTCTGATTGCCAACCCGGGCTGCTACCCGACCACGATG240.13189712024620795No Hit
TCCCGGCTGATCGCCTGATCGCCAACCCGGGCTGCTACCCGACCACGATG240.13189712024620795No Hit
TTCCGGCCGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG240.13189712024620795No Hit
TCCCGGCTGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG240.13189712024620795No Hit
TCCCGGCCGATCGCCTGATTGCCAACCCGGGCTGCTACCCGACCACGATG220.12090569355902396No Hit
TTCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG220.12090569355902396No Hit
TTCCGGCCGATCGTCTGATTGCCAACCCGGGCTGCTACCCGACCACGATG210.11540998021543196No Hit
TTCCGGCTGACCGTCTGATCGCCAACCCGGGCTGCTACCCGACCACGATG210.11540998021543196No Hit
TTCCGGCCGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG210.11540998021543196No Hit
TTCCGGCTGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG210.11540998021543196No Hit
TTCCGGCTGATCGCCTGATTGCCAACCCGGGCTGCTACCCGACCACGATG210.11540998021543196No Hit
TCCCGGCTGATCGCCTGATTGCCAACCCGGGCTGCTACCCGACCACGATG210.11540998021543196No Hit
TTCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG210.11540998021543196No Hit
TTCCGGCCGATCGCCTGATTGCCAACCCGGGCTGCTACCCGACCACGATG200.10991426687183997No Hit
TCCCGGCTGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG200.10991426687183997No Hit
TCCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG200.10991426687183997No Hit
TCCCGGCTGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG200.10991426687183997No Hit
TTCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG200.10991426687183997No Hit
TCCCGGCTGATCGTCTGATTGCCAACCCGGGCTGCTACCCGACCACGATG200.10991426687183997No Hit
TTCCGGCTGACCGTCTGATCGCCAATGTCAACGGCGTGATGAACGCGGTC190.10441855352824796No Hit
TCCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG190.10441855352824796No Hit
TCCCGGCTGACCGCCTGATTGCCAACCCGGGCTGCTACCCGACCACGATG190.10441855352824796No Hit
TTCCGGCCGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG190.10441855352824796No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)