FastQCFastQC Report
Fri 25 Oct 2024
000000000-GM647_l01_n01_P_HSD_ATH80.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GM647_l01_n01_P_HSD_ATH80.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14774
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCGGCTGATCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA2331.5770948964396914No Hit
TTCCGGCTGACCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1911.2928116962230947No Hit
TTCCGGCTGACCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1891.2792744009746853No Hit
TCCCGGCTGATCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1851.2521998104778664No Hit
TTCCGGCTGATCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1821.2318938676052524No Hit
TTCCGGCTGACCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1811.2251252199810478No Hit
TTCCGGCCGATCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1801.218356572356843No Hit
TTCCGGCTGATCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1771.198050629484229No Hit
TCCCGGCTGATCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1751.1845133342358196No Hit
TCCCGGCTGACCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1731.1709760389874102No Hit
TTCCGGCTGATCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1671.1303641532421822No Hit
TTCCGGCTGACCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1621.0965209151211588No Hit
TTCCGGCCGACCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1541.0423717341275214No Hit
TTCCGGCCGACCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1460.9882225531338839No Hit
TCCCGGCTGACCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1450.9814539055096793No Hit
TTCCGGCCGACCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1400.9476106673886557No Hit
TCCCGGCTGACCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1400.9476106673886557No Hit
TTCCGGCCGATCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1400.9476106673886557No Hit
TCCCGGCTGACCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1390.940842019764451No Hit
TTCCGGCCGATCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1360.9205360768918371No Hit
TCCCGGCCGATCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1340.9069987816434276No Hit
TTCCGGCCGATCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1330.9002301340192229No Hit
TCCCGGCCGACCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1310.8866928387708136No Hit
TCCCGGCTGATCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1300.8799241911466089No Hit
TCCCGGCCGACCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1300.8799241911466089No Hit
TCCCGGCTGATCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1190.8054690672803573No Hit
TTCCGGCCGACCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1180.7987004196561527No Hit
TCCCGGCCGACCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1140.771625829159334No Hit
TCCCGGCCGACCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1110.7513198862867199No Hit
TCCCGGCCGATCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1110.7513198862867199No Hit
TCCCGGCCGATCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1060.7174766481656966No Hit
TCCCGGCCGATCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA980.663327467172059No Hit
TCCCGGCTGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG570.385812914579667No Hit
TTCCGGCTGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG550.37227561933125763No Hit
TTCCGGCTGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG530.3587383240828483No Hit
TTCCGGCTGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG510.34520102883443887No Hit
TTCCGGCCGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG510.34520102883443887No Hit
TCCCGGCCGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG480.3248950859618248No Hit
TTCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG450.30458914308921076No Hit
TTCCGGCTGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG450.30458914308921076No Hit
TCCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG430.2910518478408014No Hit
TTCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG430.2910518478408014No Hit
TTCCGGCCGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG420.2842832002165967No Hit
TCCCGGCTGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG420.2842832002165967No Hit
TTCCGGCTGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG410.27751455259239205No Hit
TTCCGGCCGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG410.27751455259239205No Hit
TCCCGGCCGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG390.2639772573439827No Hit
TTCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG390.2639772573439827No Hit
TTCCGGCTGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG380.257208609719778No Hit
TCCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG360.24367131447136864No Hit
TCCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG360.24367131447136864No Hit
TTCCGGCCGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG360.24367131447136864No Hit
TCCCGGCCGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG340.23013401922295929No Hit
TCCCGGCCGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG330.22336537159875458No Hit
TCCCGGCCGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG330.22336537159875458No Hit
TTCCGGCCGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG320.2165967239745499No Hit
TCCCGGCTGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG320.2165967239745499No Hit
TTCCGGCCGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG320.2165967239745499No Hit
TTCCGGCCGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG320.2165967239745499No Hit
TCCCGGCTGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG320.2165967239745499No Hit
TCCCGGCCGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG300.20305942872614052No Hit
TCCCGGCTGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG270.18275348585352647No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG270.18275348585352647No Hit
TCCCGGCCGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG240.1624475429809124No Hit
TCCCGGCTGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG220.14891024773250303No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG220.14891024773250303No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG220.14891024773250303No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG210.14214160010829835No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG210.14214160010829835No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG200.13537295248409367No Hit
TTCCGGCTGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT200.13537295248409367No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG190.128604304859889No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG190.128604304859889No Hit
TTCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT190.128604304859889No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG180.12183565723568432No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG180.12183565723568432No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG170.11506700961147964No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG170.11506700961147964No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG170.11506700961147964No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG160.10829836198727495No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG160.10829836198727495No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG160.10829836198727495No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG160.10829836198727495No Hit
TTCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT160.10829836198727495No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG150.10152971436307026No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)