FastQCFastQC Report
Fri 25 Oct 2024
000000000-GM647_l01_n01_P_HSD_ATH7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GM647_l01_n01_P_HSD_ATH7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11667
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCGGCTGACCGTCTGATTGCCAAACCGTCCAATAGTGACGATGTTGCC340.29142024513585324No Hit
TCCCGGCTGACCGTCTGATCGCCAAACCGTCCAATAGTGACGATGTTGCC280.2399931430530556No Hit
TTCCGGCTGATCGTCTGATTGCCAAACCGTCCAATAGTGACGATGTTGCC280.2399931430530556No Hit
TTCCGGCCGATCGTCTGATTGCCAAACCGTCCAATAGTGACGATGTTGCC260.22285077569212308No Hit
TTCCGGCTGATCGTCTGATCGCCAAACCGTCCAATAGTGACGATGTTGCC260.22285077569212308No Hit
TTCCGGCTGACCGTCTGATCGCCAAACCGTCCAATAGTGACGATGTTGCC250.21427959201165683No Hit
TCCCGGCTGATCGTCTGATTGCCAAACCGTCCAATAGTGACGATGTTGCC250.21427959201165683No Hit
TCCCGGCTGATCGTCTGATCGCCAAACCGTCCAATAGTGACGATGTTGCC230.19713722465072425No Hit
TCCCGGCTGACCGCCTGATCGCCAAACCGTCCAATAGTGACGATGTTGCC220.188566040970258No Hit
TCCCGGCTGACCGTCTGATTGCCAAACCGTCCAATAGTGACGATGTTGCC220.188566040970258No Hit
TCCCGGCTGACCGTCTGATCGCCAATTTCCTGCGGTGGTGCCCATGATCC210.17999485728979173No Hit
TCCCGGCCGACCGCCTGATCGCCAAACCGTCCAATAGTGACGATGTTGCC200.17142367360932545No Hit
TTCCGGCTGACCGCCTGATTGCCAAACCGTCCAATAGTGACGATGTTGCC200.17142367360932545No Hit
TTCCGGCTGATCGCCTGATCGCCAAACCGTCCAATAGTGACGATGTTGCC190.16285248992885917No Hit
TTCCGGCTGACCGCCTGATCGCCAAACCGTCCAATAGTGACGATGTTGCC190.16285248992885917No Hit
TTCCGGCTGATCGCCTGATTGCCAAACCGTCCAATAGTGACGATGTTGCC190.16285248992885917No Hit
TTCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT180.15428130624839292No Hit
TCCCGGCTGACCGTCTGATTGCCAATTTCCTGCGGTGGTGCCCATGATCC180.15428130624839292No Hit
TCCCGGCCGACCGCCTGATTGCCAAACCGTCCAATAGTGACGATGTTGCC170.14571012256792662No Hit
TTCCGGCTGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG170.14571012256792662No Hit
TCCCGGCCGATCGCCTGATTGCCAAACCGTCCAATAGTGACGATGTTGCC170.14571012256792662No Hit
TCCCGGCTGACCGCCTGATTGCCAAACCGTCCAATAGTGACGATGTTGCC170.14571012256792662No Hit
TTCCGGCCGACCGTCTGATCGCCAAACCGTCCAATAGTGACGATGTTGCC170.14571012256792662No Hit
TCCCGGCTGATCGCCTGATCGCCAAACCGTCCAATAGTGACGATGTTGCC170.14571012256792662No Hit
TTCCGGCTGATCGTCTGATTGCCAATTTCCTGCGGTGGTGCCCATGATCC170.14571012256792662No Hit
TCCCGGCCGATCGTCTGATTGCCAAACCGTCCAATAGTGACGATGTTGCC160.13713893888746034No Hit
TTCCGGCTGACCGTCTGATCGCCAATTTCCTGCGGTGGTGCCCATGATCC160.13713893888746034No Hit
TTCCGGCCGACCGTCTGATTGCCAAACCGTCCAATAGTGACGATGTTGCC150.1285677552069941No Hit
TTCCGGCTGATCGCCTGATTGCCAATTTCCTGCGGTGGTGCCCATGATCC150.1285677552069941No Hit
TCCCGGCTGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC150.1285677552069941No Hit
TTCCGGCCGATCGCCTGATTGCCAAACCGTCCAATAGTGACGATGTTGCC150.1285677552069941No Hit
TCCCGGCTGATCGTCTGATTGCCAATTTCCTGCGGTGGTGCCCATGATCC150.1285677552069941No Hit
TTCCGGCCGATCGCCTGATCGCCAAACCGTCCAATAGTGACGATGTTGCC150.1285677552069941No Hit
TCCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT150.1285677552069941No Hit
TCCCGGCTGATCGCCTGATCGCCAATTTCCTGCGGTGGTGCCCATGATCC150.1285677552069941No Hit
TTCCGGCTGATCGCCTGATTGCCAATTTCCTGCGGTGGTGCCCATGATTC140.1199965715265278No Hit
TCCCGGCTGATCGTCTGATCGCCAGTTCCAGATGAACGAGACGCTCCAGG140.1199965715265278No Hit
TCCCGGCCGACCGTCTGATTGCCAAACCGTCCAATAGTGACGATGTTGCC140.1199965715265278No Hit
TTCCGGCCGATCGTCTGATCGCCAAACCGTCCAATAGTGACGATGTTGCC140.1199965715265278No Hit
TCCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC140.1199965715265278No Hit
TCCCGGCCGATCGCCTGATCGCCAAACCGTCCAATAGTGACGATGTTGCC140.1199965715265278No Hit
TCCCGGCTGATCGTCTGATCGCCAATTTCCTGCGGTGGTGCCCATGATCC140.1199965715265278No Hit
TTCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT140.1199965715265278No Hit
TTCCGGCCGATCGTCTGATTGCCAATTTCCTGCGGTGGTGCCCATGATTC140.1199965715265278No Hit
TTCCGGCCGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT140.1199965715265278No Hit
TTCCGGCCGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT140.1199965715265278No Hit
TTCCGGCTGACCGTCTGATTGCCAATTTCCTGCGGTGGTGCCCATGATCC140.1199965715265278No Hit
TTCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG140.1199965715265278No Hit
TTCCGGCCGATCGTCTGATTGCCAGTTCCAGATGAACGAGACGCTCCAGG130.11142538784606154No Hit
TCCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT130.11142538784606154No Hit
TCCCGGCTGATCGTCTGATTGCCAATTTCCTGCGGTGGTGCCGATGATCC130.11142538784606154No Hit
TCCCGGCCGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT130.11142538784606154No Hit
TCCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT130.11142538784606154No Hit
TTCCGGCCGACCGTCTGATTGCCAATTTCCTGCGGTGGTGCCCATGATCC130.11142538784606154No Hit
TTCCGGCTGACCGCCTGATTGCCAATTTCCTGCGGTGGTGCCCATGATCC130.11142538784606154No Hit
TCCCGGCTGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG130.11142538784606154No Hit
TCCCGGCTGACCGCCTGATCGCCAATTTCCTGCGGTGGTGCCCATGATCC130.11142538784606154No Hit
TCCCGGCTGATCGTCTGATTGCCAGTTCCAGATGAACGAGACGCTCCAGG130.11142538784606154No Hit
TTCCGGCCGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC130.11142538784606154No Hit
TCCCGGCCGACCGTCTGATCGCCAATTTCCTGCGGTGGTGCCCATGATTC120.10285420416559526No Hit
TCCCGGCTGACCGTCTGATTGCCAATTTCCTGCGGTGGTGCCAATGATCC120.10285420416559526No Hit
TTCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC120.10285420416559526No Hit
TCCCGGCTGATCGCCTGATTGCCAATTTCCTGCGGTGGTGCCCATGATTC120.10285420416559526No Hit
TCCCGGCTGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG120.10285420416559526No Hit
TTCCGGCTGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT120.10285420416559526No Hit
TCCCGGCTGATCGTCTGATCGCCAATTTCCTGCGGTGGTGCCAATGATCC120.10285420416559526No Hit
TCCCGGCTGACCGCCTGATTGCCAATTTCCTGCGGTGGTGCCCATGATCC120.10285420416559526No Hit
TCCCGGCCGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC120.10285420416559526No Hit
TCCCGGCCGATCGTCTGATTGCCAATTTCCTGCGGTGGTGCCGATGATTC120.10285420416559526No Hit
TTCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT120.10285420416559526No Hit
TTCCGGCTGACCGTCTGATCGCCAATTTCCTGCGGTGGTGCCAATGATTC120.10285420416559526No Hit
TTCCGGCCGATCGTCTGATTGCCAATTTCCTGCGGAGGTGCCCATGATCC120.10285420416559526No Hit
TTCCGGCCGATCGCCTGATTGCCAATTTCCTGCGGTGGTGCCCATGATCC120.10285420416559526No Hit
TCCCGGCCGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT120.10285420416559526No Hit
TCCCGGCCGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC120.10285420416559526No Hit
TTCCGGCCGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC120.10285420416559526No Hit
TTCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG120.10285420416559526No Hit
TTCCGGCTGATCGTCTGATCGCCAATTTCCTGCGGTGGTGCCCATGATTC120.10285420416559526No Hit
TCCCGGCTGATCGCCTGATTGCCAAACCGTCCAATAGTGACGATGTTGCC120.10285420416559526No Hit
TTCCGGCCGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG120.10285420416559526No Hit
TTCCGGCCGACCGTCTGATTGCCAGTTCCAGATGAACGAGACGCTCCAGG120.10285420416559526No Hit
TTCCGGCTGATCGTCTGATCGCCAATTTCCTGCGGTGGTGCCCATGATCC120.10285420416559526No Hit
TTCCGGCCGACCGCCTGATCGCCAAACCGTCCAATAGTGACGATGTTGCC120.10285420416559526No Hit
TTCCGGCTGATCGCCTGATTGCCAGTTCCAGATGAACGAGACGCTCCAGG120.10285420416559526No Hit
TCCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT120.10285420416559526No Hit
TCCCGGCTGACCGCCTGATTGCCAGTTCCAGATGAACGAGACGCTCCAGG120.10285420416559526No Hit
TCCCGGCTGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG120.10285420416559526No Hit
TTCCGGCTGACCGTCTGATTGCCAGTTCCAGATGAACGAGACGCTCCAGG120.10285420416559526No Hit
TCCCGGCCGATCGTCTGATCGCCAAACCGTCCAATAGTGACGATGTTGCC120.10285420416559526No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)