FastQCFastQC Report
Fri 25 Oct 2024
000000000-GM647_l01_n01_P_HSD_ATH76.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GM647_l01_n01_P_HSD_ATH76.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16135
Sequences flagged as poor quality0
Sequence length301
%GC56

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA2961.834521227145956No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA2611.6176014874496436No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA2501.5494267121165168No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA2361.4626588162379919No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA2331.4440656956925937No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA2301.4254725751471955No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA2241.3882863340563991No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA2181.3511000929656027No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA2091.2953207313294082No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA2081.2891230244809422No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA2071.282925317632476No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA2021.2519367833901456No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA2001.2395413696932134No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1981.2271459559962814No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1961.2147505422993492No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1951.2085528354508832No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1941.2023551286024172No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1931.196157421753951No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1831.1341803532692902No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1801.1155872327238923No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1801.1155872327238923No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1791.109389525875426No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1761.0907964053300279No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1751.0845986984815619No Hit
TTCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1691.0474124573907653No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1681.0412147505422993No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1621.004028509451503No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1610.9978308026030369No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1560.9668422683607066No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1530.9482491478153084No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1500.9296560272699101No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1400.8676789587852495No Hit
TTCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC540.33467616981716763No Hit
TCCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC430.2665013944840409No Hit
TTCCGGCTGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC420.2603036876355748No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCCGTG380.23551286024171056No Hit
TTCCGGCTGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT370.2293151533932445No Hit
TTCCGGCTGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC360.22311744654477844No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCCGTG360.22311744654477844No Hit
TCCCGGCCGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC350.21691973969631237No Hit
TTCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT330.20452432599938025No Hit
TTCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT330.20452432599938025No Hit
TTCCGGCTGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC320.19832661915091415No Hit
TCCCGGCTGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC320.19832661915091415No Hit
TCCCGGCTGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC320.19832661915091415No Hit
TTCCGGCTGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC310.19212891230244808No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCCGTG310.19212891230244808No Hit
TTCCGGCCGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC300.18593120545398203No Hit
TTCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT300.18593120545398203No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCCGTG300.18593120545398203No Hit
TCCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT300.18593120545398203No Hit
TTCCGGCTGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG300.18593120545398203No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCCGTG290.17973349860551596No Hit
TTCCGGCTGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC290.17973349860551596No Hit
TTCCGGCCGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC290.17973349860551596No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCCGTG290.17973349860551596No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCCGTG280.1735357917570499No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCCGTG280.1735357917570499No Hit
TCCCGGCCGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC280.1735357917570499No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCCGTG280.1735357917570499No Hit
TTCCGGCCGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT280.1735357917570499No Hit
TTCCGGCTGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG270.16733808490858382No Hit
TCCCGGCTGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC270.16733808490858382No Hit
TTCCGGCTGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC270.16733808490858382No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCCGTG270.16733808490858382No Hit
TTCCGGCCGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC270.16733808490858382No Hit
TCCCGGCCGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC270.16733808490858382No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCCGTG270.16733808490858382No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCCGTG270.16733808490858382No Hit
TTCCGGCCGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC270.16733808490858382No Hit
TCCCGGCCGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC260.16114037806011777No Hit
TTCCGGCCGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT260.16114037806011777No Hit
TCCCGGCCGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC260.16114037806011777No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCCGTG260.16114037806011777No Hit
TTCCGGCTGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC260.16114037806011777No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCCGTG260.16114037806011777No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCCGTG260.16114037806011777No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCCGTG260.16114037806011777No Hit
TTCCGGCTGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG250.15494267121165167No Hit
TTCCGGCCGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC250.15494267121165167No Hit
TTCCGGCTGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT250.15494267121165167No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCCGTG250.15494267121165167No Hit
TCCCGGCTGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC250.15494267121165167No Hit
TTCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT250.15494267121165167No Hit
TCCCGGCTGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC240.14874496436318563No Hit
TCCCGGCCGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC240.14874496436318563No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCCGTG240.14874496436318563No Hit
TCCCGGCTGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC240.14874496436318563No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCCGTG230.14254725751471956No Hit
TCCCGGCTGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG230.14254725751471956No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCCGTG230.14254725751471956No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCCGTG230.14254725751471956No Hit
TCCCGGCCGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT230.14254725751471956No Hit
TCCCGGCTGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC230.14254725751471956No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG230.14254725751471956No Hit
TTCCGGCCGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC220.13634955066625348No Hit
TCCCGGCCGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC220.13634955066625348No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG220.13634955066625348No Hit
TCCCGGCCGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC220.13634955066625348No Hit
TCCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT220.13634955066625348No Hit
TTCCGGCCGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC220.13634955066625348No Hit
TCCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT220.13634955066625348No Hit
TTCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT220.13634955066625348No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCCGTG220.13634955066625348No Hit
TCCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT220.13634955066625348No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG220.13634955066625348No Hit
TTCCGGCCGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC220.13634955066625348No Hit
TTCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG210.1301518438177874No Hit
TCCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT210.1301518438177874No Hit
TTCCGGCCGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG210.1301518438177874No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG210.1301518438177874No Hit
TCCCGGCTGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT210.1301518438177874No Hit
TTCCGGCCGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT210.1301518438177874No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG210.1301518438177874No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG210.1301518438177874No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG210.1301518438177874No Hit
TCCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG200.12395413696932135No Hit
TTCCGGCCGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT200.12395413696932135No Hit
TTCCGGCCGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG200.12395413696932135No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG200.12395413696932135No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCAGTG200.12395413696932135No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG200.12395413696932135No Hit
TCCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT200.12395413696932135No Hit
TCCCGGCTGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG200.12395413696932135No Hit
TTCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT200.12395413696932135No Hit
TTCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG200.12395413696932135No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCCGTG200.12395413696932135No Hit
TCCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG190.11775643012085528No Hit
TCCCGGCCGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG190.11775643012085528No Hit
TCCCGGCCGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG190.11775643012085528No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG190.11775643012085528No Hit
TCCCGGCCGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT190.11775643012085528No Hit
TCCCGGCTGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG190.11775643012085528No Hit
TTCCGGCCGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT190.11775643012085528No Hit
TTCCGGCTGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG190.11775643012085528No Hit
TCCCGGCCGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT190.11775643012085528No Hit
TTCCGGCTGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG180.11155872327238922No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG180.11155872327238922No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG180.11155872327238922No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG180.11155872327238922No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG180.11155872327238922No Hit
TCCCGGCTGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG180.11155872327238922No Hit
TCCCGGCCGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT180.11155872327238922No Hit
TTCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT180.11155872327238922No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG170.10536101642392315No Hit
TTCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG170.10536101642392315No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG170.10536101642392315No Hit
TCCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG170.10536101642392315No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCCGTG170.10536101642392315No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG170.10536101642392315No Hit
TTCCGGCCGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG170.10536101642392315No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCCGTG170.10536101642392315No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG170.10536101642392315No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG170.10536101642392315No Hit
TTCCGGCTGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG170.10536101642392315No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCAGTG170.10536101642392315No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG170.10536101642392315No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCAGTG170.10536101642392315No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG170.10536101642392315No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)