FastQCFastQC Report
Fri 25 Oct 2024
000000000-GM647_l01_n01_P_HSD_ATH60.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GM647_l01_n01_P_HSD_ATH60.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14827
Sequences flagged as poor quality0
Sequence length301
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCGGCTGATCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1460.9846900923990018No Hit
TTCCGGCTGACCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1300.8767788493963714No Hit
TTCCGGCTGATCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1270.8565454913333783No Hit
TCCCGGCTGATCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1260.8498010386457139No Hit
TTCCGGCCGATCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1170.7891009644567343No Hit
TTCCGGCTGACCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1150.7756120590814055No Hit
TTCCGGCTGATCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1150.7756120590814055No Hit
TCCCGGCTGACCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1070.7216564375800903No Hit
TTCCGGCTGACCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1040.7014230795170973No Hit
TCCCGGCCGATCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1020.6879341741417684No Hit
TTCCGGCCGACCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1010.6811897214541041No Hit
TTCCGGCTGATCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA1010.6811897214541041No Hit
TCCCGGCTGATCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1000.6744452687664395No Hit
TTCCGGCTGACCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA1000.6744452687664395No Hit
TCCCGGCTGACCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA970.6542119107034464No Hit
TCCCGGCTGATCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA970.6542119107034464No Hit
TCCCGGCTGATCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA930.6272340999527888No Hit
TCCCGGCTGACCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA920.6204896472651245No Hit
TTCCGGCCGATCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA890.6002562892021313No Hit
TCCCGGCCGATCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA880.5935118365144668No Hit
TCCCGGCCGATCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA840.5665340257638093No Hit
TCCCGGCCGACCGTCTGATTGCCAACTGAGATAACAGACAGAAACAGACA830.5597895730761449No Hit
TCCCGGCTGACCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA820.5530451203884804No Hit
TTCCGGCCGACCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA820.5530451203884804No Hit
TTCCGGCCGACCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA810.5463006677008161No Hit
TCCCGGCCGACCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA790.5328117623254872No Hit
TTCCGGCCGACCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA780.5260673096378229No Hit
TTCCGGCCGATCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA780.5260673096378229No Hit
TTCCGGCCGATCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA760.5125784042624941No Hit
TCCCGGCCGATCGCCTGATCGCCAACTGAGATAACAGACAGAAACAGACA730.4923450461995009No Hit
TCCCGGCCGACCGCCTGATTGCCAACTGAGATAACAGACAGAAACAGACA700.4721116881365077No Hit
TCCCGGCCGACCGTCTGATCGCCAACTGAGATAACAGACAGAAACAGACA700.4721116881365077No Hit
TTCCGGCTGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG670.4518783300735145No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA650.4383894246981857No Hit
TTCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG590.39792270857219936No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA570.38443380319687054No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA540.3642004451338774No Hit
TTCCGGCTGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG530.35745599244621296No Hit
TCCCGGCTGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG520.35071153975854863No Hit
TCCCGGCTGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG520.35071153975854863No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA500.33722263438321975No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA500.33722263438321975No Hit
TTCCGGCTGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG490.33047818169555543No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA490.33047818169555543No Hit
TCCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG490.33047818169555543No Hit
TTCCGGCCGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG480.323733729007891No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA480.323733729007891No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA470.3169892763202266No Hit
TTCCGGCTGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG470.3169892763202266No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA470.3169892763202266No Hit
TCCCGGCCGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG460.3102448236325622No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA460.3102448236325622No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA460.3102448236325622No Hit
TCCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG450.30350037094489785No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA450.30350037094489785No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA450.30350037094489785No Hit
TTCCGGCTGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG440.2967559182572334No Hit
TTCCGGCCGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG440.2967559182572334No Hit
TTCCGGCCGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG430.290011465569569No Hit
TTCCGGCTGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG420.28326701288190465No Hit
TCCCGGCTGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG410.2765225601942402No Hit
TCCCGGCCGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG410.2765225601942402No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA400.2697781075065758No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA400.2697781075065758No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA390.26303365481891144No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA390.26303365481891144No Hit
TTCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG380.25628920213124706No Hit
TTCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA380.25628920213124706No Hit
TCCCGGCTGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG370.24954474944358265No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA370.24954474944358265No Hit
TCCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG370.24954474944358265No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA360.24280029675591824No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA360.24280029675591824No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA340.22931139138058945No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA330.22256693869292507No Hit
TTCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG330.22256693869292507No Hit
TCCCGGCTGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG330.22256693869292507No Hit
TTCCGGCCGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG330.22256693869292507No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA330.22256693869292507No Hit
TTCCGGCCGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG330.22256693869292507No Hit
TTCCGGCCGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG320.21582248600526066No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA320.21582248600526066No Hit
TCCCGGCCGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG320.21582248600526066No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA320.21582248600526066No Hit
TCCCGGCCGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG320.21582248600526066No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA300.20233358062993187No Hit
TTCCGGCCGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG290.19558912794226746No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTCATGAACGCAGTG290.19558912794226746No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA290.19558912794226746No Hit
TCCCGGCCGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG280.18884467525460308No Hit
TCCCGGCTGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG280.18884467525460308No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTCATGAACGCAGTG270.1821002225669387No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA270.1821002225669387No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA260.17535576987927431No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA260.17535576987927431No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA250.16861131719160988No Hit
TCCCGGCCGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG250.16861131719160988No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCGGTG240.1618668645039455No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGTGTGATGAACGCCGTG230.1551224118162811No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTCATGAACGCAGTG230.1551224118162811No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTCATGAACGCAGTG230.1551224118162811No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTCATGAACGCAGTG220.1483779591286167No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCGGTG220.1483779591286167No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCTGTG210.14163350644095232No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTCATGAACGCAGTG210.14163350644095232No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTCATGAACGCAGTG210.14163350644095232No Hit
TCCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC210.14163350644095232No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTCATGAACGCAGTG200.1348890537532879No Hit
TCCCGGCCGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG200.1348890537532879No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGTGTGATGAACGCCGTG200.1348890537532879No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTC190.12814460106562353No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCGGTG190.12814460106562353No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTCATGAACGCAGTG190.12814460106562353No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAACGGTGTGATGAACGCCGTG190.12814460106562353No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCGGTG190.12814460106562353No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAACGGTGTGATGAACGCCGTG180.12140014837795912No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCGGTG180.12140014837795912No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTCATGAACGCAGTG180.12140014837795912No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAACGGTGTGATGAACGCCGTG180.12140014837795912No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAACGGTGTGATGAACGCCGTG180.12140014837795912No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCTGTG180.12140014837795912No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCGGTG170.11465569569029473No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGTGTGATGAACGCCGTG170.11465569569029473No Hit
TTCCGGCTGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC170.11465569569029473No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGTGTGATGAACGCCGTG170.11465569569029473No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCTGTG170.11465569569029473No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCTGTG170.11465569569029473No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAACGGTGTGATGAACGCCGTG170.11465569569029473No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTCATGAACGCAGTG170.11465569569029473No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAACGGTGTGATGAACGCCGTG170.11465569569029473No Hit
TCCCGGCTGATCGCCTGATCGCCAATTTTGCTGGTTTGGTGTACTTGTTT170.11465569569029473No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCGGTG160.10791124300263033No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGTGTGATGAACGCCGTG160.10791124300263033No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCGGTG160.10791124300263033No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCGGTG160.10791124300263033No Hit
TTCCGGCCGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT160.10791124300263033No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCTGTG160.10791124300263033No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAACGGTGTGATGAACGCCGTG160.10791124300263033No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCTGTG160.10791124300263033No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTC160.10791124300263033No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCAGTG160.10791124300263033No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTCATGAACGCAGTG160.10791124300263033No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAACGGTGTGATGAACGCCGTG150.10116679031496593No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAACGGTGTGATGAACGCCGTG150.10116679031496593No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAACGGTGTGATGAACGCCGTG150.10116679031496593No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCCGTC150.10116679031496593No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCTGTG150.10116679031496593No Hit
TTCCGGCCGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC150.10116679031496593No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAACGGTGTGATGAACGCCGTG150.10116679031496593No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTCATGAACGCAGTG150.10116679031496593No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCTGTG150.10116679031496593No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCGGTG150.10116679031496593No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)