FastQCFastQC Report
Fri 25 Oct 2024
000000000-GM647_l01_n01_P_HSD_ATH58.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GM647_l01_n01_P_HSD_ATH58.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15018
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC1180.7857237981089359No Hit
TTCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT1010.6725263017712079No Hit
TTCCGGCTGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC950.632574244240245No Hit
TCCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC940.6259155679850845No Hit
TTCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT910.6059395392196031No Hit
TTCCGGCCGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC900.5992808629644426No Hit
TCCCGGCTGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC880.5859635104541216No Hit
TTCCGGCTGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC870.5793048341989613No Hit
TTCCGGCTGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT870.5793048341989613No Hit
TCCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT830.5526701291783194No Hit
TTCCGGCTGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC820.5460114529231589No Hit
TCCCGGCTGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT820.5460114529231589No Hit
TTCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT820.5460114529231589No Hit
TTCCGGCTGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT800.5326941004128379No Hit
TTCCGGCCGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC800.5326941004128379No Hit
TTCCGGCTGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC790.5260354241576775No Hit
TCCCGGCTGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC780.519376747902517No Hit
TCCCGGCTGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT770.5127180716473565No Hit
TCCCGGCTGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC760.506059395392196No Hit
TTCCGGCTGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG750.49940071913703554No Hit
TTCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT750.49940071913703554No Hit
TTCCGGCTGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC740.49274204288187506No Hit
TCCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT740.49274204288187506No Hit
TTCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT740.49274204288187506No Hit
TTCCGGCTGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC740.49274204288187506No Hit
TCCCGGCCGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG730.4860833666267146No Hit
TTCCGGCCGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC720.4794246903715541No Hit
TCCCGGCTGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC720.4794246903715541No Hit
TTCCGGCCGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT710.47276601411639363No Hit
TCCCGGCCGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC710.47276601411639363No Hit
TTCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG690.4594486616060727No Hit
TCCCGGCCGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC680.4527899853509122No Hit
TTCCGGCCGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT680.4527899853509122No Hit
TTCCGGCCGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC670.4461313090957517No Hit
TCCCGGCTGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC670.4461313090957517No Hit
TTCCGGCCGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG660.43947263284059124No Hit
TCCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT660.43947263284059124No Hit
TCCCGGCCGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC650.43281395658543076No Hit
TTCCGGCTGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC650.43281395658543076No Hit
TTCCGGCCGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT650.43281395658543076No Hit
TCCCGGCTGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC640.4261552803302703No Hit
TTCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT640.4261552803302703No Hit
TTCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG630.4194966040751098No Hit
TTCCGGCCGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC620.4128379278199494No Hit
TTCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT620.4128379278199494No Hit
TTCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG620.4128379278199494No Hit
TCCCGGCCGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT610.4061792515647889No Hit
TTCCGGCTGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG610.4061792515647889No Hit
TCCCGGCCGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC610.4061792515647889No Hit
TTCCGGCCGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC610.4061792515647889No Hit
TTCCGGCCGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT600.3995205753096284No Hit
TCCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT590.39286189905446794No Hit
TTCCGGCTGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG590.39286189905446794No Hit
TTCCGGCCGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC590.39286189905446794No Hit
TTCCGGCTGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG580.3862032227993075No Hit
TTCCGGCCGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT580.3862032227993075No Hit
TCCCGGCCGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT570.37954454654414704No Hit
TCCCGGCCGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT570.37954454654414704No Hit
TCCCGGCCGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC550.3662271940338261No Hit
TCCCGGCTGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG550.3662271940338261No Hit
TTCCGGCTGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG550.3662271940338261No Hit
TTCCGGCCGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT540.3595685177786656No Hit
TCCCGGCCGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC540.3595685177786656No Hit
TCCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT540.3595685177786656No Hit
TTCCGGCCGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT540.3595685177786656No Hit
TCCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG530.35290984152350513No Hit
TCCCGGCCGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT530.35290984152350513No Hit
TCCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT530.35290984152350513No Hit
TTCCGGCCGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC520.34625116526834465No Hit
TCCCGGCCGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT520.34625116526834465No Hit
TCCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT510.3395924890131842No Hit
TTCCGGCCGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG500.3329338127580237No Hit
TCCCGGCCGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT500.3329338127580237No Hit
TTCCGGCCGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG500.3329338127580237No Hit
TCCCGGCCGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG490.3262751365028632No Hit
TCCCGGCCGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT490.3262751365028632No Hit
TTCCGGCTGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG490.3262751365028632No Hit
TCCCGGCCGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG480.31961646024770274No Hit
TTCCGGCCGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG480.31961646024770274No Hit
TTCCGGCCGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG480.31961646024770274No Hit
TCCCGGCTGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG460.3062991077373818No Hit
TCCCGGCTGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG450.2996404314822213No Hit
TCCCGGCTGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG450.2996404314822213No Hit
TCCCGGCTGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG440.2929817552270608No Hit
TCCCGGCCGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG440.2929817552270608No Hit
TCCCGGCTGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC430.2863230789719004No Hit
TCCCGGCCGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG420.2796644027167399No Hit
TTCCGGCCGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG420.2796644027167399No Hit
TCCCGGCCGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC400.26634705020641897No Hit
TCCCGGCCGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG400.26634705020641897No Hit
TCCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG390.2596883739512585No Hit
TCCCGGCCGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC390.2596883739512585No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG380.253029697696098No Hit
TCCCGGCTGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG370.24637102144093753No Hit
TCCCGGCCGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG360.23971234518577705No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG360.23971234518577705No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG350.23305366893061658No Hit
TCCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG350.23305366893061658No Hit
TTCCGGCCGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG320.21307764016513514No Hit
TTCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC300.1997602876548142No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG280.18644293514449328No Hit
TTCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC280.18644293514449328No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG260.17312558263417233No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG260.17312558263417233No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG250.16646690637901185No Hit
TTCCGGCCGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC250.16646690637901185No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG250.16646690637901185No Hit
TTCCGGCTGATCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG250.16646690637901185No Hit
TTCCGGCTGACCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG240.15980823012385137No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG240.15980823012385137No Hit
TCCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC240.15980823012385137No Hit
TCCCGGCCGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC240.15980823012385137No Hit
TCCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC240.15980823012385137No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG230.1531495538686909No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG230.1531495538686909No Hit
TCCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC230.1531495538686909No Hit
TTCCGGCTGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC230.1531495538686909No Hit
TCCCGGCCGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC230.1531495538686909No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG220.1464908776135304No Hit
TCCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC220.1464908776135304No Hit
TCCCGGCCGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC210.13983220135836996No Hit
TTCCGGCCGACCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG210.13983220135836996No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG210.13983220135836996No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG210.13983220135836996No Hit
TTCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC210.13983220135836996No Hit
TCCCGGCCGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC210.13983220135836996No Hit
TCCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC210.13983220135836996No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG210.13983220135836996No Hit
TTCCGGCCGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC200.13317352510320948No Hit
TTCCGGCCGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC200.13317352510320948No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG200.13317352510320948No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG190.126514848848049No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG190.126514848848049No Hit
TTCCGGCTGATCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG190.126514848848049No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG190.126514848848049No Hit
TTCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC190.126514848848049No Hit
TCCCGGCTGATCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG190.126514848848049No Hit
TTCCGGCCGATCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG190.126514848848049No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG190.126514848848049No Hit
TTCCGGCTGATCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG190.126514848848049No Hit
TTCCGGCCGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC190.126514848848049No Hit
TTCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC180.11985617259288853No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG180.11985617259288853No Hit
TCCCGGCTGACCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG180.11985617259288853No Hit
TCCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC180.11985617259288853No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG180.11985617259288853No Hit
TCCCGGCTGATCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG180.11985617259288853No Hit
TCCCGGCCGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC180.11985617259288853No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG170.11319749633772805No Hit
TCCCGGCTGACCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG170.11319749633772805No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG170.11319749633772805No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG170.11319749633772805No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG170.11319749633772805No Hit
TTCCGGCCGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC170.11319749633772805No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG170.11319749633772805No Hit
TCCCGGCTGACCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG170.11319749633772805No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG170.11319749633772805No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG160.10653882008256757No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAATGGCGTGATGAACGCAGTG160.10653882008256757No Hit
TCCCGGCCGACCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG160.10653882008256757No Hit
TCCCGGCCGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC160.10653882008256757No Hit
TTCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC160.10653882008256757No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)