FastQCFastQC Report
Fri 25 Oct 2024
000000000-GM647_l01_n01_P_HSD_ATH30.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GM647_l01_n01_P_HSD_ATH30.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5305
Sequences flagged as poor quality0
Sequence length301
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA400.7540056550424128No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA330.6220546654099905No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA320.6032045240339303No Hit
TTCCGGCTGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC280.527803958529689No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA260.49010367577756836No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA260.49010367577756836No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA250.47125353440150797No Hit
TCCCGGCTGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC240.4524033930254477No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA240.4524033930254477No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA240.4524033930254477No Hit
TCCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC240.4524033930254477No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA240.4524033930254477No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA230.43355325164938735No Hit
TTCCGGCTGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC230.43355325164938735No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA230.43355325164938735No Hit
TCCCGGCTGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC230.43355325164938735No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA220.41470311027332707No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA210.3958529688972668No Hit
TCCCGGCTGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC210.3958529688972668No Hit
TTCCGGCTGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC210.3958529688972668No Hit
TTCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT210.3958529688972668No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA210.3958529688972668No Hit
TTCCGGCTGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC210.3958529688972668No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA210.3958529688972668No Hit
TTCCGGCCGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC200.3770028275212064No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA200.3770028275212064No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA200.3770028275212064No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA190.35815268614514606No Hit
TCCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT190.35815268614514606No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA190.35815268614514606No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA180.3393025447690857No Hit
TTCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC180.3393025447690857No Hit
TTCCGGCCGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC180.3393025447690857No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA170.32045240339302544No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA170.32045240339302544No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA170.32045240339302544No Hit
TTCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA160.30160226201696516No Hit
TTCCGGCTGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT160.30160226201696516No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA160.30160226201696516No Hit
TCCCGGCCGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC160.30160226201696516No Hit
TCCCGGCCGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT160.30160226201696516No Hit
TTCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT160.30160226201696516No Hit
TCCCGGCTGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC160.30160226201696516No Hit
TTCCGGCCGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC160.30160226201696516No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA160.30160226201696516No Hit
TCCCGGCTGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC150.2827521206409048No Hit
TTCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT150.2827521206409048No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA150.2827521206409048No Hit
TTCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT150.2827521206409048No Hit
TCCCGGCTGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC150.2827521206409048No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA140.2639019792648445No Hit
TTCCGGCTGACCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG140.2639019792648445No Hit
TCCCGGCCGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC140.2639019792648445No Hit
TTCCGGCTGACCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG140.2639019792648445No Hit
TTCCGGCCGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT140.2639019792648445No Hit
TCCCGGCCGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC140.2639019792648445No Hit
TTCCGGCCGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC140.2639019792648445No Hit
TTCCGGCCGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT130.24505183788878418No Hit
TTCCGGCTGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC130.24505183788878418No Hit
TTCCGGCCGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC130.24505183788878418No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA130.24505183788878418No Hit
TTCCGGCTGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT130.24505183788878418No Hit
TTCCGGCTGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC130.24505183788878418No Hit
TCCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT130.24505183788878418No Hit
TCCCGGCCGATCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG130.24505183788878418No Hit
TTCCGGCTGATCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG130.24505183788878418No Hit
TTCCGGCCGATCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG120.22620169651272384No Hit
TCCCGGCTGACCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG120.22620169651272384No Hit
TTCCGGCTGACCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG120.22620169651272384No Hit
TCCCGGCTGACCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG110.20735155513666353No Hit
TTCCGGCCGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT110.20735155513666353No Hit
TTCCGGCCGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT110.20735155513666353No Hit
TTCCGGCTGATCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG110.20735155513666353No Hit
TCCCGGCCGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC110.20735155513666353No Hit
TCCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT110.20735155513666353No Hit
TTCCGGCCGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC110.20735155513666353No Hit
TCCCGGCCGACCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG110.20735155513666353No Hit
TCCCGGCCGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC110.20735155513666353No Hit
TTCCGGCCGATCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG110.20735155513666353No Hit
TTCCGGCCGACCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG110.20735155513666353No Hit
TCCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT110.20735155513666353No Hit
TCCCGGCTGACCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG110.20735155513666353No Hit
TCCCGGCCGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT110.20735155513666353No Hit
TCCCGGCTGATCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG110.20735155513666353No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAACGGTGTGATGAATGCTGTA100.1885014137606032No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA100.1885014137606032No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA100.1885014137606032No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAACGGTGTGATGAATGCTGTA100.1885014137606032No Hit
TCCCGGCTGATCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG100.1885014137606032No Hit
TTCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT100.1885014137606032No Hit
TCCCGGCCGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC100.1885014137606032No Hit
TCCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT100.1885014137606032No Hit
TTCCGGCTGATCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG100.1885014137606032No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAACGGTGTGATGAATGCTGTA100.1885014137606032No Hit
TTCCGGCCGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC90.16965127238454286No Hit
TTCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT90.16965127238454286No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAACGGTGTGATGAATGCTGTA90.16965127238454286No Hit
TCCCGGCCGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC90.16965127238454286No Hit
TTCCGGCCGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC90.16965127238454286No Hit
TCCCGGCCGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT90.16965127238454286No Hit
TTCCGGCCGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG90.16965127238454286No Hit
TCCCGGCCGATCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG90.16965127238454286No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGTGTGATGAATGCTGTA90.16965127238454286No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA90.16965127238454286No Hit
TTCCGGCTGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC90.16965127238454286No Hit
TTCCGGCCGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT90.16965127238454286No Hit
TCCCGGCCGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT90.16965127238454286No Hit
TTCCGGCTGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG80.15080113100848258No Hit
TTCCGGCCGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG80.15080113100848258No Hit
TCCCGGCCGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT80.15080113100848258No Hit
TCCCGGCCGACCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG80.15080113100848258No Hit
TCCCGGCTGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT80.15080113100848258No Hit
TCCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG80.15080113100848258No Hit
TCCCGGCTGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC80.15080113100848258No Hit
TCCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT80.15080113100848258No Hit
TTCCGGCTGACCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG80.15080113100848258No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAACGGTGTGATGAATGCTGTA80.15080113100848258No Hit
TTCCGGCCGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG80.15080113100848258No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAACGGTGTGATGAATGCTGTA80.15080113100848258No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAACGGTGTGATGAATGCTGTA80.15080113100848258No Hit
TCCCGGCTGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT80.15080113100848258No Hit
TCCCGGCCGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT80.15080113100848258No Hit
TTCCGGCCGACCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG80.15080113100848258No Hit
TTCCGGCCGACCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG80.15080113100848258No Hit
TTCCGGCCGATCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG80.15080113100848258No Hit
TTCCGGCCGATCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG80.15080113100848258No Hit
TTCCGGCCGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT70.13195098963242224No Hit
TCCCGGCTGACCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG70.13195098963242224No Hit
TCCCGGCTGATCGTCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG70.13195098963242224No Hit
TCCCGGCCGATCGTCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG70.13195098963242224No Hit
TCCCGGCCGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC70.13195098963242224No Hit
TCCCGGCCGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG70.13195098963242224No Hit
TCCCGGCCGATCGCCTGATCGCCACCAAATCAGGATAGCGCCGTATCAGG70.13195098963242224No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGTGTGATGAATGCTGTA70.13195098963242224No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGTGTGATGAATGCTGTA70.13195098963242224No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAACGGTGTGATGAATGCTGTA70.13195098963242224No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAACGGTGTGATGAATGCTGTA70.13195098963242224No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAACGGTGTGATGAACGCTGTG60.11310084825636192No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAACGGTGTGATGAATGCTGTA60.11310084825636192No Hit
TTCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG60.11310084825636192No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAACGGTGTGATGAATGCTGTA60.11310084825636192No Hit
TTCCGGCTGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG60.11310084825636192No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAACGGTGTGATGAACGCTGTG60.11310084825636192No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAACGGTGTGATGAATGCTGTA60.11310084825636192No Hit
TTCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG60.11310084825636192No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGTGTGATGAATGCTGTA60.11310084825636192No Hit
TCCCGGCCGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT60.11310084825636192No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAACGGTGTGATGAACGCTGTG60.11310084825636192No Hit
TTCCGGCTGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG60.11310084825636192No Hit
TCCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG60.11310084825636192No Hit
TCCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT60.11310084825636192No Hit
TTCCGGCTGATCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG60.11310084825636192No Hit
TCCCGGCTGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG60.11310084825636192No Hit
TCCCGGCTGATCGCCTGATTGCCACCAAATCAGGATAGCGCCGTATCAGG60.11310084825636192No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAACGGTGTGATGAATGCTGTA60.11310084825636192No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGTGTGATGAATGCTGTA60.11310084825636192No Hit
TTCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT60.11310084825636192No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)