FastQCFastQC Report
Fri 25 Oct 2024
000000000-GM647_l01_n01_P_HSD_ATH29.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GM647_l01_n01_P_HSD_ATH29.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10321
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT550.532894099408972No Hit
TTCCGGCCGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT490.47476019765526595No Hit
TTCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC450.4360042631527953No Hit
TCCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT450.4360042631527953No Hit
TCCCGGCTGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC430.4166262959015599No Hit
TTCCGGCCGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT430.4166262959015599No Hit
TCCCGGCTGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT420.40693731227594226No Hit
TTCCGGCTGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT410.3972483286503246No Hit
TCCCGGCTGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC400.3875593450247069No Hit
TTCCGGCTGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC400.3875593450247069No Hit
TCCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT400.3875593450247069No Hit
TTCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT390.37787036139908925No Hit
TTCCGGCTGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC390.37787036139908925No Hit
TTCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT380.36818137777347154No Hit
TTCCGGCCGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT380.36818137777347154No Hit
TCCCGGCTGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC380.36818137777347154No Hit
TCCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT370.3584923941478539No Hit
TTCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT360.34880341052223623No Hit
TCCCGGCCGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC350.3391144268966185No Hit
TCCCGGCTGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC350.3391144268966185No Hit
TCCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT340.3294254432710009No Hit
TCCCGGCTGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT340.3294254432710009No Hit
TTCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT340.3294254432710009No Hit
TTCCGGCTGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC330.3197364596453832No Hit
TTCCGGCTGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC330.3197364596453832No Hit
TTCCGGCCGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT320.31004747601976557No Hit
TCCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC320.31004747601976557No Hit
TCCCGGCTGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC320.31004747601976557No Hit
TTCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT320.31004747601976557No Hit
TCCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT320.31004747601976557No Hit
TTCCGGCCGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC310.30035849239414786No Hit
TTCCGGCCGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT310.30035849239414786No Hit
TTCCGGCTGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT310.30035849239414786No Hit
TCCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT310.30035849239414786No Hit
TTCCGGCTGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC310.30035849239414786No Hit
TCCCGGCCGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC290.2809805251429125No Hit
TCCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT290.2809805251429125No Hit
TCCCGGCCGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT290.2809805251429125No Hit
TTCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT290.2809805251429125No Hit
TTCCGGCCGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC280.27129154151729484No Hit
TTCCGGCCGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT280.27129154151729484No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAATGGCGTCATGAACGCCGTG280.27129154151729484No Hit
TCCCGGCTGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC280.27129154151729484No Hit
TCCCGGCCGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT280.27129154151729484No Hit
TCCCGGCCGATCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC270.2616025578916772No Hit
TTCCGGCCGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC270.2616025578916772No Hit
TTCCGGCTGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC260.2519135742660595No Hit
TCCCGGCCGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT260.2519135742660595No Hit
TCCCGGCCGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT260.2519135742660595No Hit
TCCCGGCCGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT250.2422245906404418No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAATGGCGTCATGAACGCCGTG250.2422245906404418No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAATGGCGTCATGAACGCCGTG250.2422245906404418No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAATGGTGTGATGAACGCGGTA250.2422245906404418No Hit
TTCCGGCTGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG240.23253560701482415No Hit
TTCCGGCCGACCGCCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC240.23253560701482415No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAATGGCGTCATGAACGCCGTG240.23253560701482415No Hit
TTCCGGCTGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG230.22284662338920647No Hit
TTCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG230.22284662338920647No Hit
TTCCGGCTGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC230.22284662338920647No Hit
TCCCGGCCGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC230.22284662338920647No Hit
TCCCGGCCGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC230.22284662338920647No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAATGGCGTCATGAACGCCGTG230.22284662338920647No Hit
TTCCGGCCGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT230.22284662338920647No Hit
TCCCGGCTGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC220.21315763976358879No Hit
TCCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG220.21315763976358879No Hit
TTCCGGCCGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC220.21315763976358879No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAATGGCGTCATGAACGCCGTG220.21315763976358879No Hit
TTCCGGCCGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG210.20346865613797113No Hit
TCCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC210.20346865613797113No Hit
TCCCGGCCGATCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC210.20346865613797113No Hit
TCCCGGCCGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC210.20346865613797113No Hit
TCCCGGCCGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT210.20346865613797113No Hit
TCCCGGCCGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG200.19377967251235345No Hit
TTCCGGCCGATCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC200.19377967251235345No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAATGGCGTCATGAACGCCGTG200.19377967251235345No Hit
TTCCGGCCGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG200.19377967251235345No Hit
TTCCGGCTGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG200.19377967251235345No Hit
TCCCGGCCGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT200.19377967251235345No Hit
TTCCGGCCGATCGCCTGATCGCCAACGTCAATGGCGTCATGAACGCCGTG190.18409068888673577No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAATGGTGTGATGAACGCGGTA190.18409068888673577No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAATGGCGTCATGAACGCCGTG190.18409068888673577No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAATGGCGTCATGAACGCCGTG190.18409068888673577No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAATGGCGTCATGAACGCCGTG190.18409068888673577No Hit
TTCCGGCCGACCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC190.18409068888673577No Hit
TTCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG190.18409068888673577No Hit
TTCCGGCCGACCGCCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC190.18409068888673577No Hit
TTCCGGCTGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG180.17440170526111812No Hit
TCCCGGCCGACCGTCTGATCGCCATTTTACATGGTCTTGAAGCCCTCGAC180.17440170526111812No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAATGGTGTGATGAACGCGGTA180.17440170526111812No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAATGGCGTCATGAACGCCGTG180.17440170526111812No Hit
TCCCGGCCGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG180.17440170526111812No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAATGGTGTGATGAACGCGGTA180.17440170526111812No Hit
TTCCGGCCGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG180.17440170526111812No Hit
TTCCGGCCGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG170.16471272163550044No Hit
TCCCGGCTGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG170.16471272163550044No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAATGGTGTGATGAACGCGGTA170.16471272163550044No Hit
TTCCGGCCGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG170.16471272163550044No Hit
TTCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC170.16471272163550044No Hit
TTCCGGCCGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC170.16471272163550044No Hit
TCCCGGCCGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG170.16471272163550044No Hit
TTCCGGCTGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG170.16471272163550044No Hit
TCCCGGCCGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG170.16471272163550044No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAATGGCGTCATGAACGCCGTG160.15502373800988278No Hit
TCCCGGCTGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG160.15502373800988278No Hit
TCCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG160.15502373800988278No Hit
TTCCGGCCGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG160.15502373800988278No Hit
TTCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC160.15502373800988278No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAATGGTGTGATGAACGCGGTA160.15502373800988278No Hit
TTCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC160.15502373800988278No Hit
TCCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG150.14533475438426507No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAATGGCGTCATGAACGCCGTG150.14533475438426507No Hit
TTCCGGCCGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC150.14533475438426507No Hit
TTCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC150.14533475438426507No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAATGGCGTCATGAACGCCGTG150.14533475438426507No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAATGGTGTGATGAACGCGGTA150.14533475438426507No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAATGGCGTCATGAACGCCGTG140.13564577075864742No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAATGGTGTGATGAACGCGGTA140.13564577075864742No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAATGGCGTCATGAACGCCGTG140.13564577075864742No Hit
TCCCGGCTGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG140.13564577075864742No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAATGGCGTCATGAACGCCGTG140.13564577075864742No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAATGGCGTCATGAACGCCGTG140.13564577075864742No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAATGGCGTCATGAACGCCGTG140.13564577075864742No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAATGGTGTGATGAACGCGGTA140.13564577075864742No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAATGGCGTCATGAACGCCGTG140.13564577075864742No Hit
TCCCGGCTGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG140.13564577075864742No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAATGGCGTCATGAACGCCGTG140.13564577075864742No Hit
TTCCGGCCGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG140.13564577075864742No Hit
TTCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC140.13564577075864742No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAATGGTGTGATGAACGCGGTA140.13564577075864742No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAATGGCGTCATGAACGCCGTG130.12595678713302974No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAATGGCGTCATGAACGCCGTG130.12595678713302974No Hit
TCCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC130.12595678713302974No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCGGTG130.12595678713302974No Hit
TCCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC130.12595678713302974No Hit
TCCCGGCTGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG130.12595678713302974No Hit
TTCCGGCCGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC130.12595678713302974No Hit
TCCCGGCTGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGC130.12595678713302974No Hit
TTCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC130.12595678713302974No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAATGGTGTGATGAACGCGGTA120.11626780350741207No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAATGGCGTCATGAACGCCGTG120.11626780350741207No Hit
TCCCGGCCGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG120.11626780350741207No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAATGGCGTCATGAACGCCGTG120.11626780350741207No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAATGGTGTGATGAACGCGGTA120.11626780350741207No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAATGGCGTCATGAACGCCGTG120.11626780350741207No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAATGGCGTCATGAACGCCGTG120.11626780350741207No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG120.11626780350741207No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCGGTG120.11626780350741207No Hit
TCCCGGCCGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGC120.11626780350741207No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAATGGCGTCATGAACGCCGTG120.11626780350741207No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAATGGTGTGATGAACGCGGTA120.11626780350741207No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAATGGCGTGATGAACGCAGTG110.10657881988179439No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAATGGTGTGATGAACGCGGTA110.10657881988179439No Hit
TCCCGGCCGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG110.10657881988179439No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAATGGTGTGATGAACGCGGTA110.10657881988179439No Hit
TTCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG110.10657881988179439No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAATGGTGTGATGAACGCGGTA110.10657881988179439No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCGGTG110.10657881988179439No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAATGGTGTGATGAACGCGGTA110.10657881988179439No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)