FastQCFastQC Report
Fri 25 Oct 2024
000000000-GM647_l01_n01_P_HSD_ATH15.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GM647_l01_n01_P_HSD_ATH15.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12698
Sequences flagged as poor quality0
Sequence length301
%GC55

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG1311.0316585289021893No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG1150.9056544337690976No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG1100.8662781540400063No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG1060.8347771302567333No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG1050.8269018743109152No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG1000.7875255945818239No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG990.7796503386360056No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG890.7008977791778233No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG880.6930225232320051No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG870.6851472672861868No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG870.6851472672861868No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG860.6772720113403686No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG840.6615214994487321No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG840.6615214994487321No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG830.6536462435029139No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG780.6142699637738227No Hit
TCCCGGCTGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG780.6142699637738227No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG780.6142699637738227No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG770.6063947078280044No Hit
TTCCGGCTGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG760.5985194518821861No Hit
TTCCGGCTGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG730.5748936840447315No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG720.5670184280989132No Hit
TTCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG720.5670184280989132No Hit
TTCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG710.559143172153095No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG710.559143172153095No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG690.5433926602614585No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG680.5355174043156403No Hit
TCCCGGCTGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG680.5355174043156403No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG680.5355174043156403No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG670.527642148369822No Hit
TTCCGGCCGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG660.5197668924240038No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG660.5197668924240038No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG660.5197668924240038No Hit
TTCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG650.5118916364781855No Hit
TCCCGGCTGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG650.5118916364781855No Hit
TCCCGGCTGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG650.5118916364781855No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA640.5040163805323673No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG640.5040163805323673No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA630.4961411245865491No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG620.48826586864073085No Hit
TTCCGGCTGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG620.48826586864073085No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG610.48039061269491257No Hit
TCCCGGCTGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG610.48039061269491257No Hit
TTCCGGCTGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG610.48039061269491257No Hit
TCCCGGCTGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG600.47251535674909434No Hit
TTCCGGCTGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG600.47251535674909434No Hit
TCCCGGCCGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG590.46464010080327606No Hit
TTCCGGCCGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG590.46464010080327606No Hit
TCCCGGCTGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG570.44888958891163966No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA570.44888958891163966No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA570.44888958891163966No Hit
TCCCGGCCGATCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG550.43313907702000315No Hit
TTCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG540.42526382107418487No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTGATGAACGCGGTG540.42526382107418487No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAACGCGGTG540.42526382107418487No Hit
TTCCGGCTGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG530.41738856512836664No Hit
TCCCGGCTGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG530.41738856512836664No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA510.4016380532367302No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA500.39376279729091196No Hit
TCCCGGCCGACCGTCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG480.3780122853992755No Hit
TCCCGGCCGATCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG480.3780122853992755No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA480.3780122853992755No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA470.3701370294534572No Hit
TCCCGGCCGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG470.3701370294534572No Hit
TCCCGGCCGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG470.3701370294534572No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA470.3701370294534572No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA450.35438651756182077No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA450.35438651756182077No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA430.3386360056701843No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA430.3386360056701843No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA430.3386360056701843No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA430.3386360056701843No Hit
TTCCGGCCGACCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG420.33076074972436603No Hit
TTCCGGCCGATCGTCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG420.33076074972436603No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA400.3150102378327296No Hit
TTCCGGCCGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG400.3150102378327296No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA390.30713498188691135No Hit
TTCCGGCCGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG380.29925972594109307No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA380.29925972594109307No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA380.29925972594109307No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA370.29138446999527484No Hit
TCCCGGCCGATCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG370.29138446999527484No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA370.29138446999527484No Hit
TCCCGGCCGACCGCCTGATCGCCATGTCACTTTCGTTCAAGACGACGCCG360.2835092140494566No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA360.2835092140494566No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA360.2835092140494566No Hit
TTCCGGCCGATCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA350.27563395810363833No Hit
TTCCGGCCGACCGCCTGATTGCCATGTCACTTTCGTTCAAGACGACGCCG350.27563395810363833No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA350.27563395810363833No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA350.27563395810363833No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA330.2598834462120019No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA330.2598834462120019No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA310.24413293432036542No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA290.22838242242872894No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTA290.22838242242872894No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTA260.20475665459127423No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG220.17325563080800127No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG220.17325563080800127No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG210.16538037486218302No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG200.1575051189163648No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG190.14962986297054653No Hit
TCCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT180.1417546070247283No Hit
TCCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT180.1417546070247283No Hit
TCCCGGCTGACCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT180.1417546070247283No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG180.1417546070247283No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG170.13387935107891008No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG170.13387935107891008No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG170.13387935107891008No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAATGGTGTGATGAATGCCGTG170.13387935107891008No Hit
TTCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC160.12600409513309183No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG160.12600409513309183No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG160.12600409513309183No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAATGGTGTGATGAATGCCGTG160.12600409513309183No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG160.12600409513309183No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG150.11812883918727358No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG150.11812883918727358No Hit
TTCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT150.11812883918727358No Hit
TTCCGGCTGATCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT150.11812883918727358No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG140.11025358324145534No Hit
TTCCGGCTGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT140.11025358324145534No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAATGGTGTGATGAATGCCGTG140.11025358324145534No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG140.11025358324145534No Hit
TCCCGGCTGATCGTCTGATTGCCATTTTACATGGTCTTGAAGCCCTCGAC140.11025358324145534No Hit
TTCCGGCTGATCGTCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT140.11025358324145534No Hit
TTCCGGCTGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT140.11025358324145534No Hit
TTCCGGCCGATCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT140.11025358324145534No Hit
TTCCGGCTGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT140.11025358324145534No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAATGGTGTGATGAATGCCGTG140.11025358324145534No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG140.11025358324145534No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAATGGTGTGATGAATGCCGTG140.11025358324145534No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAATGGTGTGATGAATGCCGTG140.11025358324145534No Hit
TCCCGGCCGACCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT140.11025358324145534No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAATGGTGTGATGAATGCCGTG130.10237832729563712No Hit
TTCCGGCTGACCGTCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT130.10237832729563712No Hit
TCCCGGCTGACCGCCTGATTGCCAAGAAAACAAGACAGCTCAAAACCAGT130.10237832729563712No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG130.10237832729563712No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG130.10237832729563712No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAATGGTGTGATGAATGCCGTG130.10237832729563712No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG130.10237832729563712No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAATGGTGTGATGAATGCCGTG130.10237832729563712No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAACGGGGTGATGAACGCAGTG130.10237832729563712No Hit
TTCCGGCCGATCGCCTGATCGCCAAGAAAACAAGACAGCTCAAAACCAGT130.10237832729563712No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAACGGGGTGATGAACGCAGTG130.10237832729563712No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)