FastQCFastQC Report
Fri 25 Oct 2024
000000000-GM647_l01_n01_P_HSD_ATH10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GM647_l01_n01_P_HSD_ATH10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13761
Sequences flagged as poor quality0
Sequence length301
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1921.3952474384129059No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG1821.3225783009955672No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG1801.3080444735120993No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG1781.2935106460286316No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG1771.2862437322868978No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG1711.2426422498364944No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG1641.1917738536443572No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG1611.1699731124191557No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG1591.1554392849356878No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG1581.148172371193954No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG1571.1409054574522202No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1551.1263716299687523No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1541.1191047162270185No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG1491.082770147518349No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG1481.075503233776615No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG1451.0537024925514136No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1431.0391686650679457No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG1431.0391686650679457No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG1421.0319017513262119No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG1421.0319017513262119No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1421.0319017513262119No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1370.9955671826175423No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG1370.9955671826175423No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG1360.9883002688758084No Hit
TTCCGGCCGATCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG1360.9883002688758084No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG1350.9810333551340745No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG1330.9664995276506068No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1320.9592326139088728No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1310.951965700167139No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1300.9446987864254051No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1290.9374318726836712No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1280.9301649589419373No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG1270.9228980452002035No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG1270.9228980452002035No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1260.9156311314584695No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG1230.8938303902332679No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1230.8938303902332679No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1220.886563476491534No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1210.8792965627498002No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1170.8502289077828646No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1150.8356950802993969No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG1140.8284281665576629No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG1130.8211612528159291No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG1120.8138943390741952No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1120.8138943390741952No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1090.7920935978489936No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1080.7848266841072596No Hit
TTCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1070.7775597703655258No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1070.7775597703655258No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1040.7557590291403241No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA1040.7557590291403241No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG1020.7412252016568563No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1020.7412252016568563No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG1010.7339582879151225No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA1000.7266913741733886No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA990.7194244604316548No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG980.7121575466899208No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA960.6976237192064529No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA940.6830898917229852No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA910.6612891504977836No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAATGGCGTGATGAATGCGGTG910.6612891504977836No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAATGGCGTGATGAATGCGGTG870.632221495530848No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTGATGAATGCTGTA750.5450185306300415No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTGATGAATGCTGTA730.5304847031465737No Hit
TTCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG490.3560787733449604No Hit
TTCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG420.3052103771528232No Hit
TTCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG400.2906765496693554No Hit
TCCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG400.2906765496693554No Hit
TTCCGGCTGATCGTCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG360.2616088947024199No Hit
TTCCGGCCGATCGCCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA350.254341980960686No Hit
TCCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG340.2470750672189521No Hit
TTCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG330.2398081534772182No Hit
TCCCGGCTGATCGCCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA330.2398081534772182No Hit
TCCCGGCTGACCGCCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG330.2398081534772182No Hit
TCCCGGCTGATCGTCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA320.23254123973548432No Hit
TTCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG320.23254123973548432No Hit
TCCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG310.22527432599375044No Hit
TCCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG310.22527432599375044No Hit
TCCCGGCTGATCGCCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG310.22527432599375044No Hit
TTCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG310.22527432599375044No Hit
TCCCGGCTGACCGTCTGATCGCCAATTTTACATGGTGTTTCCGCCCTCGA300.21800741225201656No Hit
TTCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG300.21800741225201656No Hit
TTCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG300.21800741225201656No Hit
TTCCGGCCGATCGTCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA300.21800741225201656No Hit
TTCCGGCTGACCGTCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG280.2034735847685488No Hit
TTCCGGCTGACCGCCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA260.18893975728508103No Hit
TCCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG260.18893975728508103No Hit
TTCCGGCCGATCGTCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG260.18893975728508103No Hit
TCCCGGCTGACCGTCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG260.18893975728508103No Hit
TCCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG250.18167284354334715No Hit
TTCCGGCCGATCGCCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG250.18167284354334715No Hit
TTCCGGCTGACCGTCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA240.17440592980161324No Hit
TTCCGGCTGATCGCCTGATCGCCAATTTTACATGGTGTTTCCGCCCTCGA240.17440592980161324No Hit
TTCCGGCCGATCGTCTGATCGCCAATTTTACATGGTGTTTCCGCCCTCGA240.17440592980161324No Hit
TTCCGGCTGACCGCCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG230.16713901605987935No Hit
TTCCGGCTGATCGTCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA230.16713901605987935No Hit
TTCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG230.16713901605987935No Hit
TCCCGGCCGACCGCCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG230.16713901605987935No Hit
TCCCGGCCGACCGCCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA230.16713901605987935No Hit
TCCCGGCCGATCGTCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA220.15987210231814547No Hit
TCCCGGCTGATCGTCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG210.1526051885764116No Hit
TCCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG210.1526051885764116No Hit
TTCCGGCTGACCGCCTGATCGCCAATTTTACATGGTGTTTCCGCCCTCGA210.1526051885764116No Hit
TCCCGGCCGACCGCCTGATCGCCAATTTTACATGGTGTTTCCGCCCTCGA210.1526051885764116No Hit
TCCCGGCTGACCGCCTGATCGCCAATTTTACATGGTGTTTCCGCCCTCGA210.1526051885764116No Hit
TCCCGGCTGACCGTCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA190.13807136109294382No Hit
TTCCGGCCGACCGTCTGATCGCCAATTTTACATGGTGTTTCCGCCCTCGA190.13807136109294382No Hit
TCCCGGCCGACCGCCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG180.13080444735120994No Hit
TTCCGGCCGATCGTCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG180.13080444735120994No Hit
TTCCGGCTGATCGTCTGATCGCCAATTTTACATGGTGTTTCCGCCCTCGA180.13080444735120994No Hit
TTCCGGCTGATCGCCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA180.13080444735120994No Hit
TTCCGGCCGATCGCCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG180.13080444735120994No Hit
TTCCGGCTGACCGTCTGATCGCCAATTTTACATGGTGTTTCCGCCCTCGA180.13080444735120994No Hit
TCCCGGCCGACCGTCTGATTGCCAACGTCAACGGCGTCATGAACGCTGTG180.13080444735120994No Hit
TCCCGGCCGACCGTCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG180.13080444735120994No Hit
TTCCGGCCGACCGCCTGATCGCCAATTTTACATGGTGTTTCCGCCCTCGA180.13080444735120994No Hit
TTCCGGCCGACCGTCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA170.12353753360947604No Hit
TCCCGGCCGATCGCCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA160.11627061986774216No Hit
TCCCGGCTGATCGCCTGATCGCCAATTTTACATGGTGTTTCCGCCCTCGA160.11627061986774216No Hit
TCCCGGCTGATCGCCTGATCGCCAACGTCAACGGCGTCATGAACGCTGTG160.11627061986774216No Hit
TTCCGGCCGATCGCCTGATCGCCAATTTTACATGGTGTTTCCGCCCTCGA150.10900370612600828No Hit
TCCCGGCCGACCGTCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA150.10900370612600828No Hit
TCCCGGCTGACCGCCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA150.10900370612600828No Hit
TCCCGGCCGACCGTCTGATCGCCAATTTTACATGGTGTTTCCGCCCTCGA140.1017367923842744No Hit
TCCCGGCTGATCGTCTGATCGCCAATTTTACATGGTGTTTCCGCCCTCGA140.1017367923842744No Hit
TTCCGGCCGACCGCCTGATTGCCAATTTTACATGGTGTTTCCGCCCTCGA140.1017367923842744No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)