FastQCFastQC Report
Mon 31 Jul 2023
000000000-GG345_l01_n02_Plate2Col5_mod.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n02_Plate2Col5_mod.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCCTCCACATATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCG3073.17073170731707No Hit
GATGTCGAAAATATCGAACCATAAAAGAATGGAAGGGAAAGGAACACGCG12.4390243902439024No Hit
GATCCTCCACATATCGAACCCTCACTTAATGGCCGGGAAAGGAACACGCG12.4390243902439024No Hit
GATCCTCCACATATCGAACCCTCAATGAATGGACGGGAAAGGTACACGAG12.4390243902439024No Hit
GATCCTCCCCATATCGACCCCTCATTGAATGCCGGGGAAAGGTCCCCGCT12.4390243902439024No Hit
GATCTCCACATATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCGT12.4390243902439024No Hit
GCTCCTCCACATATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCG12.4390243902439024No Hit
GATCCTCCACATATCGAACCCTCAATGCATGGCCGGGAAAGGTACACGCG12.4390243902439024No Hit
GGTCCTCCACATATCGATGGCGGGATTATGTGCCGGGAAAGGGACGGGGG12.4390243902439024No Hit
AATCCTCCACATATCGAACCAGATCTTGATTCAGGTAACCAAAAGCTAAC12.4390243902439024No Hit
GATCCTCCACATATCGAACCCTCAATGAATGGCCGGGCAAGGTACACGCG12.4390243902439024No Hit
GATCCTCCCCATATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCG12.4390243902439024No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)