FastQCFastQC Report
Mon 31 Jul 2023
000000000-GG345_l01_n02_Plate2Col2_mod.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n02_Plate2Col2_mod.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCCTCCACATATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCG4378.18181818181819No Hit
GATCCTCCACATATCGCACCCTCAATGAATGGCCGGGAAAGGTACACGCG23.6363636363636362No Hit
GATCCTCCACATATCGAACCCTCAATGAATGTCCGGGCAAGGTACACGCG11.8181818181818181No Hit
GCTCCTCCACATATCGAACCCTCAATGAATGGCCTGGAAAGGTACACGCG11.8181818181818181No Hit
AATAGAGACAGACAGAGGACTACAAACATAGACCAACCAATGTATTCCCG11.8181818181818181No Hit
TATCCTCCACATATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCG11.8181818181818181No Hit
GATCCTCCACATATCGAACCCTCAATGAATTGCCGGGAAAGGTACACGCG11.8181818181818181No Hit
TACCCTCCCCATTTCGACCCAGATCGTGAAACAGGTAACCACACGCTAAC11.8181818181818181No Hit
GATCCTCTACATATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCG11.8181818181818181No Hit
GATCCTCCACATATCGAACCCTCACTGAATTGCCGGGAAAGGAACACGCG11.8181818181818181No Hit
GATCCTCCACATATCGAACCCGCACTGAATGGCGGGGAAAAAAACCCGCG11.8181818181818181No Hit
GATCCTCCACATATCGAACCAGATCTTGATTCAGGGAACCAAAAGCTAAC11.8181818181818181No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)