FastQCFastQC Report
Tue 25 Jul 2023
000000000-GG345_l01_n02_Plate2Col1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n02_Plate2Col1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCCTCCACATATCGAACCAGATCTTGATTCAGGTAACCAAAAGCTAAC2048.78048780487805No Hit
GATCCTCCACATATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCG1434.146341463414636No Hit
GATCCTCCACCTATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCG12.4390243902439024No Hit
ATTACAAATTCTTAGGAATAAGAATGAAAGTAAACACACGAACCCTCAAA12.4390243902439024No Hit
AAAACTAAGTTGTGTGGTGGTAATAGACCAAAAACCCCAAATCTCGAACC12.4390243902439024No Hit
ATTAACTACTTATCTTTCTTATAGACAGGATCCTCCCCATATCCTAACCC12.4390243902439024No Hit
AAAAACAGTTCGCGTGGCAGAAAGTAACCTTCCCATATCGGTCTACACAT12.4390243902439024No Hit
AAAACACGGCAACAAAGACACAACTCAACAATTCCGAACATCTCCGAATG12.4390243902439024No Hit
ATTACATGGTCGCAGTGGTTAGATGGAGCTAAGAGAAAGGAGACTTCCGA12.4390243902439024No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)