FastQCFastQC Report
Tue 25 Jul 2023
000000000-GG345_l01_n02_Plate1Col7.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n02_Plate1Col7.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCCTCCACATATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCG2341.81818181818181No Hit
GATCCTCCACATATCGAACCAGATCTTGATTCAGGTAACCAAAAGCTAAC23.6363636363636362No Hit
GATCCTCCACATATCGAACCCTCAATGAATGGCCGGGCAAGGTACACGCG23.6363636363636362No Hit
GTAGACAAATCATCTCTTTAATAACCTGATTCAGCTCAACCAATCCGCGC11.8181818181818181No Hit
TACTTCGGCAGATAGTATAATAGATAAGAAACTCCCCATATCCTTCCCTT11.8181818181818181No Hit
CTAGAAGATTCGTAAAGGAAGAACCATCCCCATTTCCCCCCCACACTTAT11.8181818181818181No Hit
TTCGTAGGGTCGTGTAGGGTTAAGGCAGTAAACTCCACTTATCCAACCCT11.8181818181818181No Hit
TGCGTATTAGCGGAAGCCTACAACTCCCCCCTTACCCTCCTTCCATGTGT11.8181818181818181No Hit
TATCCCGCCTCTCCCGGGTCGGCATTTATAATCTAGGACGGGCCATTCTC11.8181818181818181No Hit
GATCCTCCACATATCGACCCCTCAATGAATGGCCGGGAAAGGTACACGCG11.8181818181818181No Hit
TCTGCTGAGTCCATTCGCACCCAACTCAATAACCTAATAACTCCCCCGCA11.8181818181818181No Hit
ATAAACAGGTCTTGTACTTTAAAAGAAATGATTCCCCCCCACAAATACAA11.8181818181818181No Hit
ATTACAAACTCTCGTCGAAAGACAGGATCCGCCCCACTTACACCCAAATA11.8181818181818181No Hit
ATATAATTGGCCCGTTGGGATATGTAATGAAGACAAAGTTATCCACCTAT11.8181818181818181No Hit
TATTAGCCGTCACGAGTGCAGTCGACCACTTCTCTTGCTACGCACGCATC11.8181818181818181No Hit
ACATTATGTTCATAATAAACAATAACCTCCCCTTACCGTACCCCTTCTTT11.8181818181818181No Hit
ATGATTCAATCTCACACGCACAGCAATACCCACACTACTTGAAAAACAAA11.8181818181818181No Hit
TCAGGAGACTAACCTGGGGAAAGAGACTAAAAGACAAGCACCTCCCACTA11.8181818181818181No Hit
GCCGGTCAAACTATTGCCCACACATTGAAAGAACGGGCAAGGTCCTCGCG11.8181818181818181No Hit
ATTACATGGATTCTTTAGTTGGAATTATGCTAAAAGAACGGAATATACAC11.8181818181818181No Hit
GATCCTCCACATATCGCACCCTCAATGAATGGCCGGGAAAGGTACACGCG11.8181818181818181No Hit
ACTAAAATGGCTGTATACGAGACAGGATCCTCCCCCCCTTCCACACCCCA11.8181818181818181No Hit
AATAAATGCGCCCGTTGAATGAACCAGATCCTCCCCCCATCCACTCATGT11.8181818181818181No Hit
GCTCCTCCTCATATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCG11.8181818181818181No Hit
TATCCTCCACCTATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCG11.8181818181818181No Hit
GCTCCTCCACATATCGACCCCTCAATGAATGGCCGGGAAAGGTACACGCG11.8181818181818181No Hit
GATCCTCCACATATCGAACCCTCAATGAATGGCCGGGAAAGGTCCACGCG11.8181818181818181No Hit
ATTAACCGGCGCCGAAAGAAAAGATCCTCCAATTCTATTACCAGTAACTT11.8181818181818181No Hit
GATCATCCACATATCGAACCCTCAATGAATGGCCGGGCAAGGTACACGCG11.8181818181818181No Hit
ATTAAACGTACGCGTATCGGAGGTGGTTGTAAGAAATCGGATCCTCCACA11.8181818181818181No Hit
TATCCTCCACATATCGAACCCTCAATGACTGGCCGGGAAACGTACACGCG11.8181818181818181No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)