FastQCFastQC Report
Tue 25 Jul 2023
000000000-GG345_l01_n02_Plate1Col6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n02_Plate1Col6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCCTCCACATATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCG2744.26229508196721No Hit
GATCCTCCACATATCGAACCAGATCTTGATTCAGGTAACCAAAAGCTAAC34.918032786885246No Hit
GATCCTCCACATATCGACCCCTCAATGAATGGCCGGGAAAGGTACACGCG23.278688524590164No Hit
TCAGGAAACGCTCGTGTTAATAAGTGTGTCATAAACATTTTCATTCAATA11.639344262295082No Hit
AAGGGTTCAGCTTTGTCAACAATGGAGGCAACAACTTTGCTGTGAACATC11.639344262295082No Hit
AAATACAGTTCCTATTGGAATATATAATAAACACGACCATCCCCAAATTG11.639344262295082No Hit
GATCCTCCACATATCGAACCCTAAATGAATGGCCGGGAAAGGTACACGCG11.639344262295082No Hit
TCCGGAGAGTCTCGTGGGGTTGGTTGACCGAAGCCCTCACATATCTAAAC11.639344262295082No Hit
ATTTATTTCTCTCTGTCCGCAGTTTATTCGAGACCCTATACTCCACCTAT11.639344262295082No Hit
GATCCTCCACATATCGAACCCTCAATGAATGGCCGGGTAAGGTACACGCG11.639344262295082No Hit
TGATCAAATATATACAACCACCCCACGACGAGACCGGGATGGAAAAAGCG11.639344262295082No Hit
GCTCCTCCACATATCGAACCCTCAATGAATGTCCGGGAAAGGTACACGCG11.639344262295082No Hit
GATCCATATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCGTGGTA11.639344262295082No Hit
TCGGAGAGCTTCTCGGTCGGTGATGAGTAAAAGAAACCGGATCCTCCACA11.639344262295082No Hit
ATGAACATGTGACGTAGCTTAGAGTCATGAACTTCCCCCTCTCGAAACAT11.639344262295082No Hit
TATCCTCCACATATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCG11.639344262295082No Hit
ATTATGGATACACCACCTATCATACCCCTCCTTGTTTCTGGTATCCAAAA11.639344262295082No Hit
TCCGGGGAGTCAGCTCAGGAGATGCCCCCCATCGCACCCTCCCTGTATTG11.639344262295082No Hit
TCCGGAGAGAAAAAACAGGATCCTCCACCTATCCAACCCACAATGCACAC11.639344262295082No Hit
TACGGAGCGACTCGTGGGCTCTCAAGGCGAAGTAAGAGGATGCTCCCCCG11.639344262295082No Hit
TACGAGGAGTCAGCTTGTAGGGGTTGATTAAAAGCCTGGTTTTCCACATA11.639344262295082No Hit
TCTCCACCCTCTCACGCCCCCTCCATGGTATCCCAGGCACGGATCCCCCA11.639344262295082No Hit
ATTATCAAGTCGCGTCCGGAGCCTCCCCCCATCCTACCAGATCTTTTTTC11.639344262295082No Hit
TCCTGAGAGGCCCGTGCTGAGATGTGTTTAAAAGAACAGGTTCTCCACAT11.639344262295082No Hit
ACTACCTCGTCTCGTTGGAACAGATCCTCCACCTCACCAACCCGATCGTG11.639344262295082No Hit
TTGGAGAGACCCGTCTCTCGGTAATTGATAAGCCGGCAGAGGCCTCCCCA11.639344262295082No Hit
TACGCAGTAGAGCGTGAGCCCTGCAAGATCGAACAGACAGGGTCCTCCAC11.639344262295082No Hit
TCCTGCGACTCTCTGAGTTTGGGCTGAGCATAATAAACCGGATCCTCCTC11.639344262295082No Hit
ATGCGGATCGGCCGTGGGGGGGAGGGGGTATAAGCGACAGGATCATCCAC11.639344262295082No Hit
GCTCCTCCACATATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCG11.639344262295082No Hit
ATGAAATGTGCCCGTCGGATGAGGTGAAGAAAGAAGCTCCTCCTCCAAAC11.639344262295082No Hit
TTTACTCCAAGATGTGTACCCTCAAAATGATGCCTCGCATATTACACCCT11.639344262295082No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)