FastQCFastQC Report
Tue 25 Jul 2023
000000000-GG345_l01_n02_Plate1Col4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n02_Plate1Col4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCCTCCACATATCGAACCAGATCTTGATTCAGGTAACCAAAAGCTAAC626.08695652173913No Hit
GATCCTCCACATATCGAACCCTCAATGAATGGCCGGGAAAGGTACACGCG521.73913043478261No Hit
TCAGAAGAGTCACGACGTAAGAAGAACCTCCACACATCGTCACCTCACTG14.3478260869565215No Hit
AGCTCGGAGTCGCGGTCCTAGACTTGATTATAAGACACCGGATCTTTCCC14.3478260869565215No Hit
ATAACTTTGTCGCCGTGGCACCAGAACACGGAACCTCCACCTATCGCACA14.3478260869565215No Hit
GGGATGAGTATATAAACCAGTAACCTCCCCCGATCGCACACCATATTATT14.3478260869565215No Hit
ATTAACCGCTGTCCTGGCTCGCGGTGGCTATAAAAGGCAGGGACCTCGAC14.3478260869565215No Hit
AATATTCGGTAGAATGGAGATACCACACAAAAAAAAAAAAATAGATTTAA14.3478260869565215No Hit
GATCCACCACATCTCGCCCCCTCAATGAATAGCCGGGAAAGGTACACGCG14.3478260869565215No Hit
TCCGCAGGGTCGCGCTGGGTCGCTGTATCAAAGACAGGGTTCTTCACATT14.3478260869565215No Hit
ATAACAGTGTTGTAGAGGAAAGACTCAACCCATATCCTACTAGATGTTTA14.3478260869565215No Hit
AACTGAGGTGAGTGTATGTATTCGTGAATAAAGAGGCCATGGCCTACCCG14.3478260869565215No Hit
GATCCTCCACATATCCAACCCTCAATGAATGACCGGGAAAGGTACACGCG14.3478260869565215No Hit
ATATAAAGTATATAAAGGAAAAATCACCACAAAACTACCACCCCATATAA14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)