FastQCFastQC Report
Mon 31 Jul 2023
000000000-GG345_l01_n01_Plate2Col8_mod.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n01_Plate2Col8_mod.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGCTTTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATA12.564102564102564No Hit
GATTGCAAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG12.564102564102564No Hit
TCTCATCTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC12.564102564102564No Hit
AACGGCTTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGCAA12.564102564102564No Hit
ATGGTCACTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG12.564102564102564No Hit
CGGGATGAAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGC12.564102564102564No Hit
ACTGCGCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGA12.564102564102564No Hit
GGAGCCCCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGCAA12.564102564102564No Hit
ATTCTGGTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGAAGGCG12.564102564102564No Hit
GTCAATTTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGCA12.564102564102564No Hit
TGCGTATAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC12.564102564102564No Hit
TTTTTTAGAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGA12.564102564102564No Hit
CAATAGGTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT12.564102564102564No Hit
ACTTATAAAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGC12.564102564102564No Hit
GATGTTTTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGC12.564102564102564No Hit
TGATCCATAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGA12.564102564102564No Hit
TATCCAATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGCAA12.564102564102564No Hit
CCCAGTTCAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGC12.564102564102564No Hit
TTGGTACATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGCAA12.564102564102564No Hit
GTAAGGGCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC12.564102564102564No Hit
CTGGTTCTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGA12.564102564102564No Hit
AACATATGGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC12.564102564102564No Hit
TAGGCCGATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGCAA12.564102564102564No Hit
GTAGTTTGGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGCA12.564102564102564No Hit
TGCTCGAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG12.564102564102564No Hit
TTCGTCATAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGAAGGCG12.564102564102564No Hit
TACTCGCTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT12.564102564102564No Hit
GGCTTTGATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG12.564102564102564No Hit
GTCTTGGCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTCTGCACGAAA12.564102564102564No Hit
CGGGTAGATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG12.564102564102564No Hit
CAGGCCTCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT12.564102564102564No Hit
ATTTTTGCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGCAA12.564102564102564No Hit
TTTCAATTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGA12.564102564102564No Hit
TGTGAAAGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGCAA12.564102564102564No Hit
TTAAATTAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGCA12.564102564102564No Hit
CCTAGTTTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGCA12.564102564102564No Hit
TTGAGTTTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGC12.564102564102564No Hit
TTTAGGTGAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGC12.564102564102564No Hit
TACCGCAAAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGAAGGCGAGC12.564102564102564No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)