FastQCFastQC Report
Mon 31 Jul 2023
000000000-GG345_l01_n01_Plate2Col7_mod.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n01_Plate2Col7_mod.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAAGCCGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG12.941176470588235No Hit
TATCGATGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG12.941176470588235No Hit
TTCATCCTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
TCACATGGGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
TTTGTTTAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
GGAGCAACGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
GGCATGGGGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
TCTGGGACGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
TGGTCAAAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
AGATCACTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG12.941176470588235No Hit
TAATTAAAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG12.941176470588235No Hit
TTCCGGTGGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
AGCATTAGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG12.941176470588235No Hit
TCTTCACTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
AGATGTCCGATGTCCTACTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
TGCGTATCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
TACAATTCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
CGAATCTAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
ATAGCAGAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
CCTGATAAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
GCTGCATGGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
TTATGCGTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
GCTATTGTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
ATGGATTTCCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGGGGATAA12.941176470588235No Hit
GTGTTTTTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
TAAGAGAAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG12.941176470588235No Hit
CGAATAATGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
GTCTTTTGGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
CTAATTTGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.941176470588235No Hit
GAGCACGCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
AGGCTGCTGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGA12.941176470588235No Hit
ATACCTTTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.941176470588235No Hit
GTCATTTGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG12.941176470588235No Hit
GGGACGAAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG12.941176470588235No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)