FastQCFastQC Report
Mon 31 Jul 2023
000000000-GG345_l01_n01_Plate2Col6_mod.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n01_Plate2Col6_mod.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGATCCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC13.4482758620689653No Hit
ATATTCCTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT13.4482758620689653No Hit
TGTTTGTTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT13.4482758620689653No Hit
TCGTTTTACATTCTCGAGAGAAAGTCCGTTCCTGAGCAAGCGGGAATTTA13.4482758620689653No Hit
TCACTAGTCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAA13.4482758620689653No Hit
GTCATAATGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC13.4482758620689653No Hit
CTTATTTAAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA13.4482758620689653No Hit
GTTATCCTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG13.4482758620689653No Hit
TATTCTACCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTA13.4482758620689653No Hit
GGTAATTGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGAA13.4482758620689653No Hit
TGCGTCTCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC13.4482758620689653No Hit
TGCATCTCCCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTT13.4482758620689653No Hit
ATTAATCCCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTA13.4482758620689653No Hit
AAGGATTTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA13.4482758620689653No Hit
TCTTGCTCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC13.4482758620689653No Hit
CCCATACTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA13.4482758620689653No Hit
GATTTAGCCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAA13.4482758620689653No Hit
ATGAAATCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG13.4482758620689653No Hit
CTTTTTTTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG13.4482758620689653No Hit
CTCATTTCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT13.4482758620689653No Hit
CTGTATCCGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA13.4482758620689653No Hit
TGCTTAGCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG13.4482758620689653No Hit
GTTAATCACCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTT13.4482758620689653No Hit
TTAGTCGCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC13.4482758620689653No Hit
GAGGGCGCCCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTT13.4482758620689653No Hit
GTCACTGCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG13.4482758620689653No Hit
CCATACTAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG13.4482758620689653No Hit
GTATCTAAAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAA13.4482758620689653No Hit
TCTTGAAGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAGAA13.4482758620689653No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)