FastQCFastQC Report
Mon 31 Jul 2023
000000000-GG345_l01_n01_Plate2Col5_mod.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n01_Plate2Col5_mod.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTAACAAAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
CGCTATCTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
AGAACGCTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG12.4390243902439024No Hit
CCCGTTGCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG12.4390243902439024No Hit
AGGAGGATCCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCA12.4390243902439024No Hit
GTATATCGAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
CGGTGGAGAGTGGAATACCTAGTAAGTCCGTTCCTGAGAAGCCTGGATCA12.4390243902439024No Hit
AGCTCTACAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
CCTATTCTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
TTAGCATAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC12.4390243902439024No Hit
GGGTAATGAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
CTGAAGCAAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
GATCTTTTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
ATGGTACAAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGAGCGCGAAG12.4390243902439024No Hit
CTTTACTCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
TTATTTTCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC12.4390243902439024No Hit
GCTCAATAAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
TTAATGTGAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
GACACTCAAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
TTGTCCCCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
GGAATTCCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
GCAACGTCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
ACTTGCGAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC12.4390243902439024No Hit
ATTTATTCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
ATACATTTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
GCTTATGCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
CGGGCTGGAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
ATAGCTATGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA12.4390243902439024No Hit
AGGGTAACGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC12.4390243902439024No Hit
TGGAGTGCAGTGGAATACCTTTTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
TACCATTCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
GTCTCATTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
TTCTTTATGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.4390243902439024No Hit
TATCATCCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
TTCGCACTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
GGGAGCTCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
AGAAGATTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
CTGTTAATAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
CACTTTTCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGTGGATC12.4390243902439024No Hit
ATCCTAGCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATT12.4390243902439024No Hit
CTTAATTTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC12.4390243902439024No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)