FastQCFastQC Report
Mon 31 Jul 2023
000000000-GG345_l01_n01_Plate2Col3_mod.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n01_Plate2Col3_mod.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTATATGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG19.090909090909092No Hit
ACCGGGGTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGG19.090909090909092No Hit
GAACTTACGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG19.090909090909092No Hit
TTCCCACGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG19.090909090909092No Hit
TTGGCCCAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG19.090909090909092No Hit
TAAATTTTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGG19.090909090909092No Hit
GACTGCAACCGGATTAGATACCCTGGTAGTCCACGAGACACTACGACATC19.090909090909092No Hit
CTTTTAGAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG19.090909090909092No Hit
TACATATCGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA19.090909090909092No Hit
TACCGGATAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCG19.090909090909092No Hit
ATATTCTTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG19.090909090909092No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)