FastQCFastQC Report
Mon 31 Jul 2023
000000000-GG345_l01_n01_Plate2Col2_mod.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n01_Plate2Col2_mod.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGACTTAGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
GATATCATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TTTTGGCGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TTGTATTTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
CATACGATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
GGCACCGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
CTCAGTATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TACTGTGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TGGCCCCCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
CTAAGCAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
ATTCTGCTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
AGACCTGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
CCTTGAATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
ACCGTCCCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
CATAGTTGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
GTTTGTTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TTTCGGAGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TGCGGTGTTTGATCGAGTAAGCCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TGGGGCATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
GCTTGCGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TCATTCGATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
AGGCTTCGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
GTTCGCATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
CGTTCGGATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
AGTTTAAGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TCTTTGCCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TCCATTACTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TGACGGTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TTCGCGCGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
CTTTAGGGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TGTGCTATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
CAATCAGGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
ATGGACCCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
AGACCAAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
CAGCTGTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TGTAGGTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TCTTCATGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TCGTCCGCTTGATAGATTCCCTCCGTTCCCTCGCCACCGGGAATTTAACG11.8181818181818181No Hit
GTGGAATTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
GATGGGAGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TACCGGTGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
CACAATAACATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAA11.8181818181818181No Hit
AAGAAGTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
CACTAGTTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
CCTTGAGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TTGGTATCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAGCG11.8181818181818181No Hit
TATTCATCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
CTAAAGAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TTCTAGAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
GGGACACGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TGCAATTGAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCG11.8181818181818181No Hit
TCTTGCGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TTAACCTCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
TTCGAGAGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit
ATAATACTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG11.8181818181818181No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)