FastQCFastQC Report
Wed 2 Aug 2023
000000000-GG345_l01_n01_Plate2Col1_mod_third.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n01_Plate2Col1_mod_third.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1511
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCATACGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG30.1985440105890139No Hit
TATTCATTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG30.1985440105890139No Hit
CCTATGACAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGAGCGCG20.13236267372600927No Hit
GGCTAGGAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG20.13236267372600927No Hit
AACGTTTTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG20.13236267372600927No Hit
ACCACAAAAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGCAGGCAAAG20.13236267372600927No Hit
ATGCAGCGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG20.13236267372600927No Hit
TTAAACTTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG20.13236267372600927No Hit
TATGTTTGGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG20.13236267372600927No Hit
GTGCCGTTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG20.13236267372600927No Hit
TAATTTTAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG20.13236267372600927No Hit
TAAATGGAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG20.13236267372600927No Hit
TATTTTGTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG20.13236267372600927No Hit
TCATTATCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG20.13236267372600927No Hit
TTCATATTGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG20.13236267372600927No Hit
TTTGTATAGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG20.13236267372600927No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)