FastQCFastQC Report
Tue 25 Jul 2023
000000000-GG345_l01_n01_Plate2Col1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n01_Plate2Col1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAACCGCACCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGGGGATAA12.4390243902439024No Hit
CTTAGTTCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCG12.4390243902439024No Hit
ACGTCCTCCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAA12.4390243902439024No Hit
GAAAAATCGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATAC12.4390243902439024No Hit
TTCTCTGCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGGA12.4390243902439024No Hit
TTAGTGGCAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAG12.4390243902439024No Hit
TTTATTTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATACG12.4390243902439024No Hit
TGCAGGATCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAA12.4390243902439024No Hit
GCTAGCGCCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAA12.4390243902439024No Hit
TAATCATTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAG12.4390243902439024No Hit
TGGGACAAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATAC12.4390243902439024No Hit
ATTGTTTTGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGG12.4390243902439024No Hit
TAACGGTACCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGGGGATAA12.4390243902439024No Hit
TACTGTTCCCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGGGGATAA12.4390243902439024No Hit
TCGGATAGCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAA12.4390243902439024No Hit
ACATGAACAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAG12.4390243902439024No Hit
GTACTGCACCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGGGGATAA12.4390243902439024No Hit
AATGCCAACATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAA12.4390243902439024No Hit
TCTTTGAGGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGG12.4390243902439024No Hit
GAATATGTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCG12.4390243902439024No Hit
CCATCTGCAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCG12.4390243902439024No Hit
TGATTTTAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATAC12.4390243902439024No Hit
GAAGTCAAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATAC12.4390243902439024No Hit
TGTGTCCTAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCG12.4390243902439024No Hit
CTAGCGTGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGGA12.4390243902439024No Hit
GACTGTGACCTTAGAACTAAGTAAGACCGTTCCTGAGAAAGAGGGGATAA12.4390243902439024No Hit
TCTTCTGCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAACG12.4390243902439024No Hit
CTGCCGTGAGTGGAATACCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATA12.4390243902439024No Hit
CGCGCTGTGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGG12.4390243902439024No Hit
AGCCTATACATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAA12.4390243902439024No Hit
GGTGAAATCCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGGGGATAA12.4390243902439024No Hit
CATGTTTAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATAC12.4390243902439024No Hit
TATAGGACGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATAC12.4390243902439024No Hit
TAACTGGCAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAG12.4390243902439024No Hit
AGCAGTAGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGGA12.4390243902439024No Hit
GAATTGGAGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAAGG12.4390243902439024No Hit
TATGTCAGCCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGA12.4390243902439024No Hit
TGAGGTAGGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATAC12.4390243902439024No Hit
TTTTTCATCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGCTGGCGAA12.4390243902439024No Hit
TGTAGATAGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATAC12.4390243902439024No Hit
GTTACCCATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATACG12.4390243902439024No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)