FastQCFastQC Report
Tue 25 Jul 2023
000000000-GG345_l01_n01_Plate2Col10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-GG345_l01_n01_Plate2Col10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCGGTGCCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGTTAGCCAT11.3513513513513513No Hit
TCCTCAGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTAAATCTTAAA11.3513513513513513No Hit
CCCCAATCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTAAATCTTAAA11.3513513513513513No Hit
TTGAGATCGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGTAAATCTTAA11.3513513513513513No Hit
AGGCTACATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
GCCTTATTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTAAATCTTAAA11.3513513513513513No Hit
TTTTCGGGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTAAATCTTAAA11.3513513513513513No Hit
TGCATTTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
TTAGGTGGAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGTCTGCACGA11.3513513513513513No Hit
CCCCTTATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
CTCTCAGATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
GTGTTCCATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTAAATCTTAAA11.3513513513513513No Hit
AGATCGTGCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGTCTGCACG11.3513513513513513No Hit
CCATGGTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
GCACTTAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
GCGTGTACGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGGGAATTTAAC11.3513513513513513No Hit
AAAGTGTGGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGGCTATAGTGT11.3513513513513513No Hit
TTAAAAATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
TAATAAAAGATGTCCTAGTAAGTCCGTTCCTGAGCAAGCGTATATCCGAG11.3513513513513513No Hit
AATTATGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
CGGCTCAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTAAATCTTAAA11.3513513513513513No Hit
GGGTGTGGAAGGCGTCTAGTAGTCCGTTCCTGAGCAAGCGTCTGCACGAA11.3513513513513513No Hit
GCGCATCGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
AAGCTAGTAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGTCTGCACGA11.3513513513513513No Hit
ACGCCGGCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTAAATCTTAAA11.3513513513513513No Hit
CTAGTGGTCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGTTAGCCAT11.3513513513513513No Hit
TGGTGAGGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
TTAAATAGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTAAATCTTAAA11.3513513513513513No Hit
AGGTTGGGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
CATAAGGCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTACATATAAGG11.3513513513513513No Hit
TTAAGCCGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAAG11.3513513513513513No Hit
AGACCCCCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTAAATCTTAAA11.3513513513513513No Hit
AGGATCGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGGGGATAATACG11.3513513513513513No Hit
CGTGTTTTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
GTCCTTCCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTAAATCTTAAA11.3513513513513513No Hit
CATTACTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
CAGTACCTCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGTCTGCACG11.3513513513513513No Hit
TTGTCCAGAAGGCGTCTAGTAAGTCCGTTCCTGAGCAAGCGTTAGCCATG11.3513513513513513No Hit
AGGAAGGCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAGGATTTGGGG11.3513513513513513No Hit
GGCATGTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
CTTCAGCTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
AACATTGGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
TGACAAGGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAGGATTTGGGG11.3513513513513513No Hit
AATAGAGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGGATGTGGTG11.3513513513513513No Hit
ATGTATGCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
TGCCATTCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
AAGAGGGGTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTAAATCTTAAA11.3513513513513513No Hit
TTATTAAACATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGTCTGCACG11.3513513513513513No Hit
ACCGAGATTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
GGGTTCAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
ATCTAATCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGAGGATTTGGGG11.3513513513513513No Hit
GGATCAGCCATTCTCGAGAGTAAGTCCGTTCCTGAGCAAGCGTTAGCCAT11.3513513513513513No Hit
GGTCTGTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
AGCCGGCTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
ATTTAGTGGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGAGGATCGTTA11.3513513513513513No Hit
GTCTGGAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGTGTACGAAA11.3513513513513513No Hit
GGTAGTCATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
GTTCAGCTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
CGAAAATTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTAAATCTTAAA11.3513513513513513No Hit
GCGTCACCTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTAAATCTTAAA11.3513513513513513No Hit
CGCCTGCGGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGAGGATTTGGG11.3513513513513513No Hit
AGAAACACTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTACATATAAGG11.3513513513513513No Hit
GACACCAATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTACATATAAGG11.3513513513513513No Hit
TTTGAAGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTCTGCACGAAA11.3513513513513513No Hit
TCTTCAGCGGTATCAAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAAACA11.3513513513513513No Hit
TACTAGCTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
ATGTAAGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
CTGGTCGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
CATCTCGTTTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTAAATCTTAAA11.3513513513513513No Hit
ACTCCCTGGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGTGGATCAGAA11.3513513513513513No Hit
GTATCACATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
TCGTTTTATTGATCGAGTAAGTCCGTTCCTGAGCAAGCGTGCATAAACCA11.3513513513513513No Hit
CTGGAAGTGCATTGATAGTAAGTCCGTTCCTGAGCAAGCGAGGATTTGGG11.3513513513513513No Hit
AGGTCTCACCTTAGTACTAAGTAAGTCCGTTCCTGAGCAAGCGTGCATAA11.3513513513513513No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)